Coexpression cluster: Cluster_657 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0035556 intracellular signal transduction 7.59% (6/79) 3.82 5e-06 0.001671
GO:0007165 signal transduction 10.13% (8/79) 2.82 1.8e-05 0.003211
GO:0006482 protein demethylation 2.53% (2/79) 6.53 0.000228 0.007224
GO:0008214 protein dealkylation 2.53% (2/79) 6.53 0.000228 0.007224
GO:0018209 peptidyl-serine modification 3.8% (3/79) 4.54 0.000315 0.007318
GO:0018105 peptidyl-serine phosphorylation 3.8% (3/79) 4.54 0.000315 0.007318
GO:0050789 regulation of biological process 16.46% (13/79) 1.64 0.000252 0.007323
GO:0016577 histone demethylation 2.53% (2/79) 6.64 0.000196 0.007596
GO:0070076 histone lysine demethylation 2.53% (2/79) 6.64 0.000196 0.007596
GO:0006896 Golgi to vacuole transport 2.53% (2/79) 6.35 0.000292 0.007842
GO:0033169 histone H3-K9 demethylation 2.53% (2/79) 6.65 0.000191 0.009513
GO:0032454 histone H3K9 demethylase activity 2.53% (2/79) 6.65 0.000191 0.009513
GO:0065007 biological regulation 16.46% (13/79) 1.53 0.000495 0.010808
GO:0050794 regulation of cellular process 16.46% (13/79) 1.71 0.000156 0.010872
GO:0000938 GARP complex 2.53% (2/79) 6.88 0.000139 0.012159
GO:0019905 syntaxin binding 2.53% (2/79) 5.78 0.000633 0.012987
GO:0070988 demethylation 2.53% (2/79) 5.57 0.000848 0.013446
GO:0032456 endocytic recycling 2.53% (2/79) 7.01 0.000117 0.013568
GO:0032452 histone demethylase activity 2.53% (2/79) 5.59 0.000827 0.013741
GO:0140457 protein demethylase activity 2.53% (2/79) 5.59 0.000827 0.013741
GO:0141052 histone H3 demethylase activity 2.53% (2/79) 5.69 0.000722 0.013993
GO:0042147 retrograde transport, endosome to Golgi 2.53% (2/79) 5.64 0.000771 0.01416
GO:0098876 vesicle-mediated transport to the plasma membrane 2.53% (2/79) 5.33 0.001184 0.014753
GO:0004163 diphosphomevalonate decarboxylase activity 1.27% (1/79) 9.72 0.001183 0.015286
GO:0005814 centriole 1.27% (1/79) 9.72 0.001183 0.015286
GO:0007099 centriole replication 1.27% (1/79) 9.72 0.001183 0.015286
GO:0098534 centriole assembly 1.27% (1/79) 9.72 0.001183 0.015286
GO:0016482 cytosolic transport 2.53% (2/79) 5.43 0.001029 0.015612
GO:0008832 dGTPase activity 1.27% (1/79) 9.09 0.001839 0.016045
GO:0006203 dGTP catabolic process 1.27% (1/79) 9.09 0.001839 0.016045
GO:0009146 purine nucleoside triphosphate catabolic process 1.27% (1/79) 9.09 0.001839 0.016045
GO:0009151 purine deoxyribonucleotide metabolic process 1.27% (1/79) 9.09 0.001839 0.016045
GO:0009155 purine deoxyribonucleotide catabolic process 1.27% (1/79) 9.09 0.001839 0.016045
GO:0009200 deoxyribonucleoside triphosphate metabolic process 1.27% (1/79) 9.09 0.001839 0.016045
GO:0046070 dGTP metabolic process 1.27% (1/79) 9.09 0.001839 0.016045
GO:0009204 deoxyribonucleoside triphosphate catabolic process 1.27% (1/79) 9.09 0.001839 0.016045
GO:0009217 purine deoxyribonucleoside triphosphate catabolic process 1.27% (1/79) 9.09 0.001839 0.016045
GO:0009215 purine deoxyribonucleoside triphosphate metabolic process 1.27% (1/79) 9.09 0.001839 0.016045
GO:0016793 triphosphoric monoester hydrolase activity 1.27% (1/79) 9.09 0.001839 0.016045
GO:0016773 phosphotransferase activity, alcohol group as acceptor 11.39% (9/79) 1.69 0.001891 0.016093
GO:0031490 chromatin DNA binding 2.53% (2/79) 4.84 0.002287 0.018139
GO:0000118 histone deacetylase complex 2.53% (2/79) 4.85 0.002253 0.018287
GO:0032451 demethylase activity 2.53% (2/79) 4.81 0.002381 0.018463
GO:0046386 deoxyribose phosphate catabolic process 1.27% (1/79) 8.81 0.002233 0.018551
GO:0016301 kinase activity 11.39% (9/79) 1.63 0.002511 0.019052
GO:0006892 post-Golgi vesicle-mediated transport 2.53% (2/79) 5.08 0.001652 0.019881
GO:0006796 phosphate-containing compound metabolic process 12.66% (10/79) 1.5 0.00278 0.020641
GO:0006793 phosphorus metabolic process 12.66% (10/79) 1.49 0.002897 0.021063
GO:0009264 deoxyribonucleotide catabolic process 1.27% (1/79) 8.14 0.003544 0.025239
GO:0004672 protein kinase activity 10.13% (8/79) 1.67 0.003658 0.025532
GO:0007034 vacuolar transport 2.53% (2/79) 4.38 0.004279 0.029281
GO:0009143 nucleoside triphosphate catabolic process 1.27% (1/79) 7.72 0.004722 0.030518
GO:0000149 SNARE binding 2.53% (2/79) 4.31 0.004673 0.030771
GO:0004430 1-phosphatidylinositol 4-kinase activity 1.27% (1/79) 7.76 0.004591 0.030813
GO:0009394 2'-deoxyribonucleotide metabolic process 1.27% (1/79) 7.5 0.005507 0.033717
GO:0019692 deoxyribose phosphate metabolic process 1.27% (1/79) 7.5 0.005507 0.033717
GO:0019287 isopentenyl diphosphate biosynthetic process, mevalonate pathway 1.27% (1/79) 7.54 0.005376 0.034113
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.39% (9/79) 1.43 0.006017 0.036203
GO:0016197 endosomal transport 2.53% (2/79) 4.11 0.006151 0.036387
GO:0000785 chromatin 2.53% (2/79) 4.09 0.006273 0.036487
GO:0018193 peptidyl-amino acid modification 3.8% (3/79) 3.0 0.006476 0.037053
GO:0071786 endoplasmic reticulum tubular network organization 1.27% (1/79) 7.22 0.006683 0.037618
GO:0043408 regulation of MAPK cascade 1.27% (1/79) 6.85 0.00864 0.047863
GO:0005744 TIM23 mitochondrial import inner membrane translocase complex 1.27% (1/79) 6.81 0.008901 0.048537
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (79) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms