Coexpression cluster: Cluster_6822 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0001056 RNA polymerase III activity 50.0% (2/4) 10.76 0.0 1.8e-05
GO:0001054 RNA polymerase I activity 50.0% (2/4) 10.91 0.0 2.9e-05
GO:0001055 RNA polymerase II activity 50.0% (2/4) 9.78 2e-06 4.7e-05
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 50.0% (2/4) 8.6 1e-05 0.00018
GO:0097747 RNA polymerase activity 50.0% (2/4) 8.28 1.5e-05 0.000188
GO:0034062 5'-3' RNA polymerase activity 50.0% (2/4) 8.28 1.5e-05 0.000188
GO:0006351 DNA-templated transcription 50.0% (2/4) 7.28 6.2e-05 0.000649
GO:0016779 nucleotidyltransferase activity 50.0% (2/4) 6.9 0.000105 0.00085
GO:0003677 DNA binding 75.0% (3/4) 4.67 0.0001 0.000912
GO:0032774 RNA biosynthetic process 50.0% (2/4) 6.76 0.000126 0.000923
GO:0034654 nucleobase-containing compound biosynthetic process 50.0% (2/4) 5.87 0.000435 0.002886
GO:0140098 catalytic activity, acting on RNA 50.0% (2/4) 5.42 0.000801 0.003896
GO:0048188 Set1C/COMPASS complex 25.0% (1/4) 10.01 0.000971 0.00394
GO:0018130 heterocycle biosynthetic process 50.0% (2/4) 5.51 0.000715 0.004013
GO:0019438 aromatic compound biosynthetic process 50.0% (2/4) 5.43 0.00079 0.004118
GO:0003676 nucleic acid binding 75.0% (3/4) 3.51 0.00108 0.00415
GO:1901362 organic cyclic compound biosynthetic process 50.0% (2/4) 5.29 0.000969 0.004162
GO:0051568 histone H3-K4 methylation 25.0% (1/4) 10.47 0.000705 0.004291
GO:0009059 macromolecule biosynthetic process 50.0% (2/4) 5.31 0.000941 0.004292
GO:0044271 cellular nitrogen compound biosynthetic process 50.0% (2/4) 5.04 0.001359 0.004961
GO:0035097 histone methyltransferase complex 25.0% (1/4) 9.43 0.00145 0.005041
GO:0034968 histone lysine methylation 25.0% (1/4) 9.07 0.001862 0.00618
GO:0034708 methyltransferase complex 25.0% (1/4) 8.82 0.002215 0.007029
GO:0140640 catalytic activity, acting on a nucleic acid 50.0% (2/4) 4.63 0.002374 0.00722
GO:0018022 peptidyl-lysine methylation 25.0% (1/4) 8.59 0.0026 0.007592
GO:0016571 histone methylation 25.0% (1/4) 8.48 0.002793 0.007841
GO:0016070 RNA metabolic process 50.0% (2/4) 4.36 0.00342 0.009246
GO:0008213 protein alkylation 25.0% (1/4) 7.71 0.004771 0.011609
GO:0006479 protein methylation 25.0% (1/4) 7.71 0.004771 0.011609
GO:0044249 cellular biosynthetic process 50.0% (2/4) 4.05 0.00523 0.012315
GO:0043170 macromolecule metabolic process 75.0% (3/4) 2.78 0.004741 0.01236
GO:1901576 organic substance biosynthetic process 50.0% (2/4) 3.93 0.006164 0.013636
GO:0006807 nitrogen compound metabolic process 75.0% (3/4) 2.64 0.006393 0.013725
GO:0018205 peptidyl-lysine modification 25.0% (1/4) 7.34 0.006163 0.014059
GO:0009058 biosynthetic process 50.0% (2/4) 3.86 0.006821 0.014227
GO:0016570 histone modification 25.0% (1/4) 6.96 0.00799 0.016202
GO:0090304 nucleic acid metabolic process 50.0% (2/4) 3.65 0.009081 0.017917
GO:0016772 transferase activity, transferring phosphorus-containing groups 50.0% (2/4) 3.57 0.010068 0.019341
GO:0044238 primary metabolic process 75.0% (3/4) 2.38 0.010635 0.019409
GO:0097159 organic cyclic compound binding 75.0% (3/4) 2.39 0.010561 0.019769
GO:0043414 macromolecule methylation 25.0% (1/4) 6.39 0.011881 0.021155
GO:0071704 organic substance metabolic process 75.0% (3/4) 2.29 0.012655 0.021483
GO:0006139 nucleobase-containing compound metabolic process 50.0% (2/4) 3.41 0.012431 0.021606
GO:0006725 cellular aromatic compound metabolic process 50.0% (2/4) 3.28 0.014846 0.02356
GO:0046483 heterocycle metabolic process 50.0% (2/4) 3.31 0.014202 0.023563
GO:0008152 metabolic process 75.0% (3/4) 2.22 0.014528 0.023568
GO:0034641 cellular nitrogen compound metabolic process 50.0% (2/4) 3.23 0.015943 0.023752
GO:1901360 organic cyclic compound metabolic process 50.0% (2/4) 3.24 0.015697 0.023873
GO:0032259 methylation 25.0% (1/4) 6.0 0.015525 0.024113
GO:0000976 transcription cis-regulatory region binding 25.0% (1/4) 5.77 0.01814 0.025965
GO:0001067 transcription regulatory region nucleic acid binding 25.0% (1/4) 5.77 0.01814 0.025965
GO:0018193 peptidyl-amino acid modification 25.0% (1/4) 5.72 0.018869 0.026489
GO:1990837 sequence-specific double-stranded DNA binding 25.0% (1/4) 5.67 0.019545 0.02692
GO:0003690 double-stranded DNA binding 25.0% (1/4) 5.09 0.029066 0.039292
GO:0016740 transferase activity 50.0% (2/4) 2.69 0.032411 0.043018
GO:1990234 transferase complex 25.0% (1/4) 4.75 0.036596 0.047705
GO:0005488 binding 75.0% (3/4) 1.73 0.038182 0.0489
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms