Coexpression cluster: Cluster_785 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009873 ethylene-activated signaling pathway 18.57% (13/70) 8.93 0.0 0.0
GO:0000160 phosphorelay signal transduction system 18.57% (13/70) 7.61 0.0 0.0
GO:0009755 hormone-mediated signaling pathway 18.57% (13/70) 6.8 0.0 0.0
GO:0031323 regulation of cellular metabolic process 37.14% (26/70) 3.44 0.0 0.0
GO:2001141 regulation of RNA biosynthetic process 32.86% (23/70) 3.81 0.0 0.0
GO:0006355 regulation of DNA-templated transcription 32.86% (23/70) 3.81 0.0 0.0
GO:0019222 regulation of metabolic process 37.14% (26/70) 3.39 0.0 0.0
GO:0051252 regulation of RNA metabolic process 32.86% (23/70) 3.74 0.0 0.0
GO:0019219 regulation of nucleobase-containing compound metabolic process 32.86% (23/70) 3.69 0.0 0.0
GO:0051171 regulation of nitrogen compound metabolic process 32.86% (23/70) 3.51 0.0 0.0
GO:0080090 regulation of primary metabolic process 32.86% (23/70) 3.49 0.0 0.0
GO:0003700 DNA-binding transcription factor activity 25.71% (18/70) 4.26 0.0 0.0
GO:0010468 regulation of gene expression 32.86% (23/70) 3.41 0.0 0.0
GO:0010556 regulation of macromolecule biosynthetic process 32.86% (23/70) 3.4 0.0 0.0
GO:0009889 regulation of biosynthetic process 32.86% (23/70) 3.38 0.0 0.0
GO:0031326 regulation of cellular biosynthetic process 32.86% (23/70) 3.38 0.0 0.0
GO:0003677 DNA binding 31.43% (22/70) 3.42 0.0 0.0
GO:0140110 transcription regulator activity 25.71% (18/70) 4.01 0.0 0.0
GO:0060255 regulation of macromolecule metabolic process 32.86% (23/70) 3.27 0.0 0.0
GO:0035556 intracellular signal transduction 18.57% (13/70) 5.11 0.0 0.0
GO:0050794 regulation of cellular process 37.14% (26/70) 2.88 0.0 0.0
GO:0065007 biological regulation 38.57% (27/70) 2.76 0.0 0.0
GO:0050789 regulation of biological process 37.14% (26/70) 2.81 0.0 0.0
GO:0007165 signal transduction 18.57% (13/70) 3.7 0.0 0.0
GO:0003676 nucleic acid binding 31.43% (22/70) 2.26 0.0 0.0
GO:0080036 regulation of cytokinin-activated signaling pathway 4.29% (3/70) 9.52 0.0 0.0
GO:0080037 negative regulation of cytokinin-activated signaling pathway 4.29% (3/70) 9.52 0.0 0.0
GO:2000762 regulation of phenylpropanoid metabolic process 4.29% (3/70) 7.79 0.0 2e-06
GO:0043455 regulation of secondary metabolic process 4.29% (3/70) 7.69 0.0 2e-06
GO:0010648 negative regulation of cell communication 4.29% (3/70) 7.43 1e-06 4e-06
GO:0023057 negative regulation of signaling 4.29% (3/70) 7.43 1e-06 4e-06
GO:0009968 negative regulation of signal transduction 4.29% (3/70) 7.43 1e-06 4e-06
GO:0048585 negative regulation of response to stimulus 4.29% (3/70) 7.16 1e-06 6e-06
GO:0097159 organic cyclic compound binding 32.86% (23/70) 1.19 7.4e-05 0.000326
GO:0023051 regulation of signaling 4.29% (3/70) 5.04 0.000113 0.00046
GO:0010646 regulation of cell communication 4.29% (3/70) 5.04 0.000113 0.000471
GO:0009966 regulation of signal transduction 4.29% (3/70) 5.05 0.000111 0.000475
GO:0048583 regulation of response to stimulus 4.29% (3/70) 4.15 0.000682 0.00269
GO:0005488 binding 40.0% (28/70) 0.83 0.000804 0.003091
GO:0048523 negative regulation of cellular process 5.71% (4/70) 2.86 0.002344 0.008789
GO:0048519 negative regulation of biological process 5.71% (4/70) 2.83 0.002498 0.009139
GO:0005829 cytosol 7.14% (5/70) 2.33 0.003238 0.011565
GO:0043565 sequence-specific DNA binding 5.71% (4/70) 2.5 0.005609 0.019565
GO:0004602 glutathione peroxidase activity 1.43% (1/70) 6.84 0.008699 0.029657
GO:0004557 alpha-galactosidase activity 1.43% (1/70) 6.64 0.009969 0.031816
GO:0052692 raffinose alpha-galactosidase activity 1.43% (1/70) 6.64 0.009969 0.031816
GO:0008150 biological_process 41.43% (29/70) 0.57 0.00977 0.032566
GO:0042044 fluid transport 1.43% (1/70) 6.51 0.010891 0.033341
GO:0006833 water transport 1.43% (1/70) 6.51 0.010891 0.033341
GO:0004022 alcohol dehydrogenase (NAD+) activity 1.43% (1/70) 5.96 0.015949 0.046007
GO:0018455 alcohol dehydrogenase [NAD(P)+] activity 1.43% (1/70) 5.96 0.015949 0.046007
GO:0048471 perinuclear region of cytoplasm 1.43% (1/70) 5.99 0.015605 0.046816
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (70) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms