Coexpression cluster: Cluster_6434 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043565 sequence-specific DNA binding 75.0% (3/4) 6.22 4e-06 0.000139
GO:0003700 DNA-binding transcription factor activity 75.0% (3/4) 5.8 1e-05 0.000163
GO:0140110 transcription regulator activity 75.0% (3/4) 5.55 1.6e-05 0.000184
GO:0009889 regulation of biosynthetic process 75.0% (3/4) 4.57 0.000124 0.0003
GO:0031323 regulation of cellular metabolic process 75.0% (3/4) 4.45 0.000156 0.000312
GO:0019219 regulation of nucleobase-containing compound metabolic process 75.0% (3/4) 4.88 6.5e-05 0.000317
GO:0031326 regulation of cellular biosynthetic process 75.0% (3/4) 4.57 0.000123 0.000323
GO:0019222 regulation of metabolic process 75.0% (3/4) 4.41 0.000172 0.000324
GO:0060255 regulation of macromolecule metabolic process 75.0% (3/4) 4.46 0.000153 0.000326
GO:0046983 protein dimerization activity 50.0% (2/4) 6.67 0.000144 0.000327
GO:0051252 regulation of RNA metabolic process 75.0% (3/4) 4.93 5.8e-05 0.000329
GO:0010556 regulation of macromolecule biosynthetic process 75.0% (3/4) 4.59 0.000117 0.000332
GO:0003677 DNA binding 75.0% (3/4) 4.67 0.0001 0.00034
GO:2001141 regulation of RNA biosynthetic process 75.0% (3/4) 5.01 5e-05 0.00034
GO:0006355 regulation of DNA-templated transcription 75.0% (3/4) 5.01 5e-05 0.00034
GO:0005634 nucleus 75.0% (3/4) 4.34 0.000197 0.000352
GO:0010468 regulation of gene expression 75.0% (3/4) 4.6 0.000115 0.000354
GO:0080090 regulation of primary metabolic process 75.0% (3/4) 4.68 9.7e-05 0.000368
GO:0051171 regulation of nitrogen compound metabolic process 75.0% (3/4) 4.7 9.5e-05 0.000403
GO:0050794 regulation of cellular process 75.0% (3/4) 3.9 0.000493 0.000838
GO:0050789 regulation of biological process 75.0% (3/4) 3.82 0.00057 0.000923
GO:0065007 biological regulation 75.0% (3/4) 3.72 0.000703 0.001087
GO:0003676 nucleic acid binding 75.0% (3/4) 3.51 0.00108 0.001597
GO:0043227 membrane-bounded organelle 75.0% (3/4) 3.41 0.001337 0.001818
GO:0043231 intracellular membrane-bounded organelle 75.0% (3/4) 3.42 0.001307 0.001852
GO:0043226 organelle 75.0% (3/4) 3.2 0.002037 0.002565
GO:0043229 intracellular organelle 75.0% (3/4) 3.2 0.002036 0.002663
GO:0097159 organic cyclic compound binding 75.0% (3/4) 2.39 0.010561 0.012825
GO:0110165 cellular anatomical entity 75.0% (3/4) 2.09 0.019151 0.022453
GO:0005575 cellular_component 75.0% (3/4) 1.91 0.027169 0.030792
GO:0005515 protein binding 50.0% (2/4) 2.74 0.030393 0.033334
GO:0005488 binding 75.0% (3/4) 1.73 0.038182 0.040569
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms