Coexpression cluster: Cluster_156 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008889 glycerophosphodiester phosphodiesterase activity 9.95% (19/191) 8.25 0.0 0.0
GO:0008081 phosphoric diester hydrolase activity 9.95% (19/191) 5.94 0.0 0.0
GO:0042578 phosphoric ester hydrolase activity 9.95% (19/191) 3.72 0.0 0.0
GO:0016760 cellulose synthase (UDP-forming) activity 5.24% (10/191) 5.49 0.0 0.0
GO:0016759 cellulose synthase activity 5.24% (10/191) 5.45 0.0 0.0
GO:0009833 plant-type primary cell wall biogenesis 5.24% (10/191) 5.5 0.0 0.0
GO:0005802 trans-Golgi network 6.28% (12/191) 4.66 0.0 0.0
GO:0030243 cellulose metabolic process 5.24% (10/191) 5.26 0.0 0.0
GO:0030244 cellulose biosynthetic process 5.24% (10/191) 5.26 0.0 0.0
GO:0098791 Golgi apparatus subcompartment 6.28% (12/191) 4.53 0.0 0.0
GO:0031984 organelle subcompartment 6.28% (12/191) 4.5 0.0 0.0
GO:0001763 morphogenesis of a branching structure 2.62% (5/191) 8.85 0.0 0.0
GO:0009832 plant-type cell wall biogenesis 5.24% (10/191) 4.95 0.0 0.0
GO:0051273 beta-glucan metabolic process 5.24% (10/191) 4.93 0.0 0.0
GO:0051274 beta-glucan biosynthetic process 5.24% (10/191) 4.93 0.0 0.0
GO:0071669 plant-type cell wall organization or biogenesis 5.24% (10/191) 4.74 0.0 0.0
GO:0042546 cell wall biogenesis 5.24% (10/191) 4.71 0.0 0.0
GO:0009250 glucan biosynthetic process 5.24% (10/191) 4.56 0.0 0.0
GO:0000271 polysaccharide biosynthetic process 5.24% (10/191) 4.25 0.0 0.0
GO:0044042 glucan metabolic process 5.24% (10/191) 4.15 0.0 0.0
GO:0071554 cell wall organization or biogenesis 5.24% (10/191) 4.1 0.0 0.0
GO:0044085 cellular component biogenesis 5.24% (10/191) 4.08 0.0 0.0
GO:0006629 lipid metabolic process 9.95% (19/191) 2.56 0.0 0.0
GO:0004650 polygalacturonase activity 3.14% (6/191) 5.93 0.0 0.0
GO:0016788 hydrolase activity, acting on ester bonds 9.95% (19/191) 2.45 0.0 0.0
GO:0035251 UDP-glucosyltransferase activity 5.24% (10/191) 3.81 0.0 0.0
GO:0016051 carbohydrate biosynthetic process 5.24% (10/191) 3.77 0.0 0.0
GO:0005975 carbohydrate metabolic process 8.9% (17/191) 2.57 0.0 0.0
GO:0005976 polysaccharide metabolic process 5.24% (10/191) 3.66 0.0 0.0
GO:1903047 mitotic cell cycle process 5.24% (10/191) 3.67 0.0 0.0
GO:0046527 glucosyltransferase activity 5.24% (10/191) 3.53 0.0 0.0
GO:0009653 anatomical structure morphogenesis 2.62% (5/191) 5.57 0.0 1e-06
GO:0008150 biological_process 44.5% (85/191) 0.68 1e-06 4e-06
GO:0008194 UDP-glycosyltransferase activity 5.24% (10/191) 2.96 1e-06 5e-06
GO:0022402 cell cycle process 5.24% (10/191) 2.82 2e-06 1.2e-05
GO:0016787 hydrolase activity 14.66% (28/191) 1.42 2e-06 1.3e-05
GO:0016758 hexosyltransferase activity 5.24% (10/191) 2.75 3e-06 1.8e-05
GO:0003824 catalytic activity 30.89% (59/191) 0.77 1.3e-05 7e-05
GO:0044238 primary metabolic process 26.18% (50/191) 0.86 1.4e-05 7.6e-05
GO:1900150 regulation of defense response to fungus 1.57% (3/191) 5.86 2.2e-05 0.000111
GO:0071704 organic substance metabolic process 26.7% (51/191) 0.8 3.5e-05 0.000174
GO:0003700 DNA-binding transcription factor activity 5.76% (11/191) 2.1 6.4e-05 0.000316
GO:0032501 multicellular organismal process 2.62% (5/191) 3.6 6.7e-05 0.000321
GO:0016020 membrane 13.61% (26/191) 1.18 8.9e-05 0.000419
GO:0002831 regulation of response to biotic stimulus 1.57% (3/191) 5.13 9.6e-05 0.000441
GO:0032101 regulation of response to external stimulus 1.57% (3/191) 5.04 0.000115 0.000505
GO:0016757 glycosyltransferase activity 5.24% (10/191) 2.14 0.000114 0.000511
GO:0008152 metabolic process 26.7% (51/191) 0.74 0.000122 0.000513
GO:0005886 plasma membrane 6.81% (13/191) 1.79 0.000122 0.000523
GO:0030036 actin cytoskeleton organization 1.57% (3/191) 4.87 0.000163 0.000672
GO:0009059 macromolecule biosynthetic process 5.24% (10/191) 2.05 0.000182 0.000735
GO:0045010 actin nucleation 1.57% (3/191) 4.8 0.000186 0.000738
GO:0005515 protein binding 15.18% (29/191) 1.02 0.000225 0.000876
GO:0031347 regulation of defense response 1.57% (3/191) 4.65 0.000257 0.000979
GO:0140110 transcription regulator activity 5.76% (11/191) 1.85 0.000292 0.001092
GO:0003674 molecular_function 47.64% (91/191) 0.43 0.000319 0.001175
GO:0016740 transferase activity 15.18% (29/191) 0.97 0.000394 0.001423
GO:0046983 protein dimerization activity 3.14% (6/191) 2.68 0.000404 0.001436
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 3.66% (7/191) 2.27 0.000705 0.002462
GO:0032502 developmental process 2.62% (5/191) 2.82 0.000802 0.002755
GO:0080134 regulation of response to stress 1.57% (3/191) 3.81 0.001373 0.004636
GO:0016798 hydrolase activity, acting on glycosyl bonds 3.66% (7/191) 2.06 0.001645 0.005466
GO:0006355 regulation of DNA-templated transcription 6.28% (12/191) 1.43 0.001941 0.006153
GO:2001141 regulation of RNA biosynthetic process 6.28% (12/191) 1.43 0.001941 0.006153
GO:0030029 actin filament-based process 1.57% (3/191) 3.64 0.001895 0.006195
GO:0051252 regulation of RNA metabolic process 6.28% (12/191) 1.36 0.002909 0.009081
GO:0019219 regulation of nucleobase-containing compound metabolic process 6.28% (12/191) 1.3 0.003976 0.012223
GO:0071840 cellular component organization or biogenesis 6.81% (13/191) 1.21 0.004699 0.014236
GO:0007015 actin filament organization 1.57% (3/191) 3.16 0.004841 0.014452
GO:0051015 actin filament binding 1.57% (3/191) 3.11 0.005309 0.015623
GO:0008168 methyltransferase activity 2.62% (5/191) 2.17 0.005553 0.01611
GO:0016741 transferase activity, transferring one-carbon groups 2.62% (5/191) 2.11 0.006556 0.018759
GO:0003779 actin binding 1.57% (3/191) 2.85 0.008631 0.024355
GO:0110165 cellular anatomical entity 24.61% (47/191) 0.48 0.009777 0.027218
GO:0051171 regulation of nitrogen compound metabolic process 6.28% (12/191) 1.12 0.010213 0.028052
GO:0097435 supramolecular fiber organization 1.57% (3/191) 2.72 0.011016 0.02947
GO:0080090 regulation of primary metabolic process 6.28% (12/191) 1.11 0.010939 0.029651
GO:0048583 regulation of response to stimulus 1.57% (3/191) 2.7 0.011475 0.030305
GO:0006468 protein phosphorylation 6.28% (12/191) 1.03 0.015593 0.04066
GO:0010468 regulation of gene expression 6.28% (12/191) 1.03 0.01614 0.04156
GO:0010556 regulation of macromolecule biosynthetic process 6.28% (12/191) 1.02 0.016921 0.043034
GO:0016310 phosphorylation 6.28% (12/191) 0.99 0.019269 0.047255
GO:0009889 regulation of biosynthetic process 6.28% (12/191) 0.99 0.019227 0.047721
GO:0031326 regulation of cellular biosynthetic process 6.28% (12/191) 0.99 0.01913 0.048059
GO:0004672 protein kinase activity 6.28% (12/191) 0.98 0.019875 0.048167
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (191) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms