Coexpression cluster: Cluster_6596 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 100.0% (2/2) 8.52 7e-06 7.4e-05
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 100.0% (2/2) 8.61 7e-06 8.8e-05
GO:0000987 cis-regulatory region sequence-specific DNA binding 100.0% (2/2) 8.75 5e-06 0.000108
GO:1990837 sequence-specific double-stranded DNA binding 100.0% (2/2) 7.67 2.4e-05 0.000138
GO:0000976 transcription cis-regulatory region binding 100.0% (2/2) 7.77 2.1e-05 0.000139
GO:0001067 transcription regulatory region nucleic acid binding 100.0% (2/2) 7.77 2.1e-05 0.000139
GO:0000978 RNA polymerase II cis-regulatory region sequence-specific DNA binding 100.0% (2/2) 8.84 5e-06 0.000191
GO:0003690 double-stranded DNA binding 100.0% (2/2) 7.09 5.4e-05 0.00027
GO:0043565 sequence-specific DNA binding 100.0% (2/2) 6.63 0.000102 0.000453
GO:0003700 DNA-binding transcription factor activity 100.0% (2/2) 6.22 0.00018 0.000721
GO:0140110 transcription regulator activity 100.0% (2/2) 5.97 0.000256 0.000931
GO:2001141 regulation of RNA biosynthetic process 100.0% (2/2) 5.42 0.000545 0.001678
GO:0006355 regulation of DNA-templated transcription 100.0% (2/2) 5.42 0.000545 0.001678
GO:0051252 regulation of RNA metabolic process 100.0% (2/2) 5.35 0.000603 0.001722
GO:0019219 regulation of nucleobase-containing compound metabolic process 100.0% (2/2) 5.29 0.000652 0.00174
GO:0009889 regulation of biosynthetic process 100.0% (2/2) 4.98 0.001001 0.00182
GO:0031326 regulation of cellular biosynthetic process 100.0% (2/2) 4.98 0.000999 0.001903
GO:0003677 DNA binding 100.0% (2/2) 5.09 0.000868 0.001928
GO:0010556 regulation of macromolecule biosynthetic process 100.0% (2/2) 5.01 0.000964 0.001929
GO:0031323 regulation of cellular metabolic process 100.0% (2/2) 4.87 0.001171 0.001952
GO:0019222 regulation of metabolic process 100.0% (2/2) 4.82 0.001247 0.001996
GO:0010468 regulation of gene expression 100.0% (2/2) 5.02 0.000951 0.002003
GO:0080090 regulation of primary metabolic process 100.0% (2/2) 5.1 0.000853 0.002007
GO:0060255 regulation of macromolecule metabolic process 100.0% (2/2) 4.88 0.001157 0.002012
GO:0051171 regulation of nitrogen compound metabolic process 100.0% (2/2) 5.11 0.000837 0.002093
GO:0005634 nucleus 100.0% (2/2) 4.76 0.001367 0.002103
GO:0050794 regulation of cellular process 100.0% (2/2) 4.31 0.002541 0.003764
GO:0050789 regulation of biological process 100.0% (2/2) 4.24 0.002804 0.004006
GO:0065007 biological regulation 100.0% (2/2) 4.14 0.003232 0.004457
GO:0003676 nucleic acid binding 100.0% (2/2) 3.93 0.004321 0.005762
GO:0043227 membrane-bounded organelle 100.0% (2/2) 3.82 0.004993 0.006242
GO:0043231 intracellular membrane-bounded organelle 100.0% (2/2) 3.83 0.004919 0.006347
GO:0043226 organelle 100.0% (2/2) 3.62 0.006651 0.007825
GO:0043229 intracellular organelle 100.0% (2/2) 3.62 0.00665 0.00806
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.8 0.020611 0.023555
GO:0110165 cellular anatomical entity 100.0% (2/2) 2.5 0.031232 0.034702
GO:0005575 cellular_component 100.0% (2/2) 2.32 0.039968 0.043209
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms