Coexpression cluster: Cluster_562 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:1990404 NAD+-protein ADP-ribosyltransferase activity 5.1% (5/98) 8.48 0.0 0.0
GO:0070212 protein poly-ADP-ribosylation 5.1% (5/98) 8.48 0.0 0.0
GO:0003950 NAD+ ADP-ribosyltransferase activity 5.1% (5/98) 8.05 0.0 0.0
GO:0005575 cellular_component 46.94% (46/98) 1.23 0.0 0.0
GO:0016763 pentosyltransferase activity 5.1% (5/98) 6.04 0.0 2e-06
GO:0034605 cellular response to heat 4.08% (4/98) 5.93 1e-06 5.4e-05
GO:0005730 nucleolus 6.12% (6/98) 4.14 1e-06 9.6e-05
GO:0009408 response to heat 4.08% (4/98) 5.51 2e-06 0.000112
GO:0110165 cellular anatomical entity 37.76% (37/98) 1.1 2e-06 0.00012
GO:0033554 cellular response to stress 9.18% (9/98) 2.92 3e-06 0.000131
GO:1990440 obsolete positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress 2.04% (2/98) 9.58 3e-06 0.000136
GO:0031293 membrane protein intracellular domain proteolysis 2.04% (2/98) 9.58 3e-06 0.000136
GO:0051716 cellular response to stimulus 9.18% (9/98) 2.88 4e-06 0.000152
GO:0003712 transcription coregulator activity 5.1% (5/98) 4.38 5e-06 0.000154
GO:0009266 response to temperature stimulus 4.08% (4/98) 5.22 5e-06 0.00016
GO:0007166 cell surface receptor signaling pathway 5.1% (5/98) 4.26 7e-06 0.000202
GO:0008150 biological_process 48.98% (48/98) 0.82 7e-06 0.000213
GO:0051091 positive regulation of DNA-binding transcription factor activity 2.04% (2/98) 8.83 9e-06 0.00023
GO:0140096 catalytic activity, acting on a protein 18.37% (18/98) 1.7 9e-06 0.00023
GO:0051090 regulation of DNA-binding transcription factor activity 2.04% (2/98) 8.72 1.1e-05 0.000253
GO:0006302 double-strand break repair 5.1% (5/98) 4.13 1.1e-05 0.000254
GO:0004577 N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity 2.04% (2/98) 8.58 1.3e-05 0.00028
GO:0009987 cellular process 36.73% (36/98) 1.0 1.5e-05 0.000309
GO:0006269 DNA replication, synthesis of RNA primer 2.04% (2/98) 8.33 1.8e-05 0.000364
GO:0043541 UDP-N-acetylglucosamine transferase complex 2.04% (2/98) 8.22 2.1e-05 0.000408
GO:1905897 regulation of response to endoplasmic reticulum stress 2.04% (2/98) 7.97 3.1e-05 0.000562
GO:0043228 non-membrane-bounded organelle 8.16% (8/98) 2.71 3.4e-05 0.000562
GO:0003896 DNA primase activity 2.04% (2/98) 7.94 3.2e-05 0.000563
GO:0043232 intracellular non-membrane-bounded organelle 8.16% (8/98) 2.71 3.4e-05 0.000581
GO:0051641 cellular localization 8.16% (8/98) 2.62 5.2e-05 0.000791
GO:0003674 molecular_function 55.1% (54/98) 0.64 5.1e-05 0.000805
GO:0099022 vesicle tethering 2.04% (2/98) 7.41 6.7e-05 0.000931
GO:0090522 vesicle tethering involved in exocytosis 2.04% (2/98) 7.41 6.7e-05 0.000931
GO:0051640 organelle localization 4.08% (4/98) 4.25 6.4e-05 0.000952
GO:0033619 membrane protein proteolysis 2.04% (2/98) 7.26 8.2e-05 0.001117
GO:0005658 alpha DNA polymerase:primase complex 2.04% (2/98) 7.17 9.3e-05 0.001226
GO:0043687 post-translational protein modification 7.14% (7/98) 2.7 0.000111 0.001427
GO:0032991 protein-containing complex 14.29% (14/98) 1.63 0.000172 0.002037
GO:0003824 catalytic activity 33.67% (33/98) 0.9 0.000164 0.002046
GO:0016740 transferase activity 19.39% (19/98) 1.32 0.000172 0.002086
GO:0016757 glycosyltransferase activity 7.14% (7/98) 2.58 0.000183 0.002111
GO:0050789 regulation of biological process 15.31% (15/98) 1.53 0.000201 0.002266
GO:0004674 protein serine/threonine kinase activity 7.14% (7/98) 2.53 0.000232 0.002552
GO:0006904 vesicle docking involved in exocytosis 2.04% (2/98) 6.48 0.000242 0.002604
GO:0006488 dolichol-linked oligosaccharide biosynthetic process 2.04% (2/98) 6.46 0.000249 0.002621
GO:0009628 response to abiotic stimulus 4.08% (4/98) 3.73 0.000255 0.002631
GO:0019348 dolichol metabolic process 2.04% (2/98) 6.32 0.000305 0.003077
GO:0036211 protein modification process 14.29% (14/98) 1.52 0.00035 0.003459
GO:0050794 regulation of cellular process 14.29% (14/98) 1.5 0.000407 0.003934
GO:0065007 biological regulation 15.31% (15/98) 1.43 0.000426 0.00404
GO:0016093 polyprenol metabolic process 2.04% (2/98) 6.04 0.000449 0.004172
GO:0006357 regulation of transcription by RNA polymerase II 5.1% (5/98) 2.94 0.000521 0.00457
GO:0060255 regulation of macromolecule metabolic process 11.22% (11/98) 1.72 0.000517 0.004624
GO:0140029 exocytic process 2.04% (2/98) 5.94 0.000513 0.004676
GO:0019538 protein metabolic process 16.33% (16/98) 1.33 0.000568 0.004891
GO:0008375 acetylglucosaminyltransferase activity 2.04% (2/98) 5.82 0.000603 0.005104
GO:0008237 metallopeptidase activity 3.06% (3/98) 4.19 0.000641 0.005331
GO:0031982 vesicle 4.08% (4/98) 3.36 0.000669 0.005465
GO:0006490 oligosaccharide-lipid intermediate biosynthetic process 2.04% (2/98) 5.72 0.000688 0.00553
GO:0019222 regulation of metabolic process 11.22% (11/98) 1.67 0.000705 0.005567
GO:0048278 vesicle docking 2.04% (2/98) 5.59 0.00083 0.006448
GO:0006893 Golgi to plasma membrane transport 2.04% (2/98) 5.55 0.000869 0.006643
GO:0080135 regulation of cellular response to stress 2.04% (2/98) 5.51 0.000929 0.006673
GO:0010468 regulation of gene expression 10.2% (10/98) 1.73 0.00092 0.00671
GO:0043226 organelle 18.37% (18/98) 1.17 0.000908 0.006728
GO:0043229 intracellular organelle 18.37% (18/98) 1.17 0.000907 0.006827
GO:0010556 regulation of macromolecule biosynthetic process 10.2% (10/98) 1.72 0.000968 0.00685
GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay 2.04% (2/98) 5.45 0.000998 0.006958
GO:0006281 DNA repair 5.1% (5/98) 2.71 0.001075 0.007385
GO:0009889 regulation of biosynthetic process 10.2% (10/98) 1.69 0.001112 0.007423
GO:0031326 regulation of cellular biosynthetic process 10.2% (10/98) 1.69 0.001106 0.007488
GO:0042575 DNA polymerase complex 2.04% (2/98) 5.34 0.001159 0.007629
GO:0051648 vesicle localization 2.04% (2/98) 5.27 0.001275 0.00765
GO:0051650 establishment of vesicle localization 2.04% (2/98) 5.27 0.001275 0.00765
GO:0099518 vesicle cytoskeletal trafficking 2.04% (2/98) 5.29 0.001251 0.007703
GO:0099515 actin filament-based transport 2.04% (2/98) 5.29 0.001251 0.007703
GO:0030050 vesicle transport along actin filament 2.04% (2/98) 5.29 0.001251 0.007703
GO:0030048 actin filament-based movement 2.04% (2/98) 5.29 0.001251 0.007703
GO:0030705 cytoskeleton-dependent intracellular transport 2.04% (2/98) 5.25 0.001323 0.007742
GO:0000146 microfilament motor activity 2.04% (2/98) 5.26 0.001307 0.007743
GO:0043412 macromolecule modification 14.29% (14/98) 1.34 0.001204 0.007815
GO:0016459 myosin complex 2.04% (2/98) 5.16 0.001498 0.008657
GO:0006974 DNA damage response 5.1% (5/98) 2.58 0.00161 0.009192
GO:0098876 vesicle-mediated transport to the plasma membrane 2.04% (2/98) 5.02 0.001812 0.010222
GO:0031323 regulation of cellular metabolic process 10.2% (10/98) 1.58 0.001982 0.011055
GO:0006355 regulation of DNA-templated transcription 8.16% (8/98) 1.81 0.00216 0.011766
GO:2001141 regulation of RNA biosynthetic process 8.16% (8/98) 1.81 0.00216 0.011766
GO:0051171 regulation of nitrogen compound metabolic process 9.18% (9/98) 1.67 0.002203 0.011867
GO:0046907 intracellular transport 5.1% (5/98) 2.46 0.002302 0.01226
GO:0140056 organelle localization by membrane tethering 2.04% (2/98) 4.81 0.002384 0.012282
GO:0022406 membrane docking 2.04% (2/98) 4.81 0.002384 0.012282
GO:0080090 regulation of primary metabolic process 9.18% (9/98) 1.65 0.002347 0.01236
GO:0006892 post-Golgi vesicle-mediated transport 2.04% (2/98) 4.77 0.002525 0.012868
GO:0015030 Cajal body 1.02% (1/98) 8.58 0.002606 0.013142
GO:0051649 establishment of localization in cell 5.1% (5/98) 2.41 0.002662 0.013283
GO:0046854 phosphatidylinositol phosphate biosynthetic process 2.04% (2/98) 4.71 0.002726 0.013461
GO:0006950 response to stress 10.2% (10/98) 1.51 0.002783 0.0136
GO:0016772 transferase activity, transferring phosphorus-containing groups 11.22% (11/98) 1.41 0.002845 0.013762
GO:0051252 regulation of RNA metabolic process 8.16% (8/98) 1.73 0.00293 0.014031
GO:0005524 ATP binding 12.24% (12/98) 1.31 0.003235 0.015334
GO:0006810 transport 10.2% (10/98) 1.46 0.003538 0.016602
GO:0019219 regulation of nucleobase-containing compound metabolic process 8.16% (8/98) 1.68 0.003716 0.017267
GO:0015629 actin cytoskeleton 2.04% (2/98) 4.47 0.003803 0.0175
GO:0048193 Golgi vesicle transport 3.06% (3/98) 3.26 0.003957 0.018037
GO:0004222 metalloendopeptidase activity 2.04% (2/98) 4.41 0.004088 0.018453
GO:0005737 cytoplasm 9.18% (9/98) 1.51 0.004466 0.019971
GO:0016043 cellular component organization 8.16% (8/98) 1.63 0.004577 0.020274
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 2.04% (2/98) 4.3 0.00476 0.020892
GO:0051234 establishment of localization 10.2% (10/98) 1.39 0.004833 0.021016
GO:0140110 transcription regulator activity 6.12% (6/98) 1.94 0.005049 0.021758
GO:0098796 membrane protein complex 4.08% (4/98) 2.55 0.005114 0.021838
GO:0008773 [protein-PII] uridylyltransferase activity 1.02% (1/98) 7.45 0.005692 0.023259
GO:0035639 purine ribonucleoside triphosphate binding 12.24% (12/98) 1.21 0.005644 0.023264
GO:0000145 exocyst 2.04% (2/98) 4.18 0.005607 0.023315
GO:0080134 regulation of response to stress 2.04% (2/98) 4.19 0.00556 0.023321
GO:0044093 positive regulation of molecular function 2.04% (2/98) 4.19 0.005528 0.023394
GO:0003690 double-stranded DNA binding 4.08% (4/98) 2.47 0.006082 0.02464
GO:0005515 protein binding 15.31% (15/98) 1.03 0.006251 0.024901
GO:0051179 localization 10.2% (10/98) 1.34 0.006213 0.024959
GO:0006887 exocytosis 2.04% (2/98) 4.07 0.006484 0.025192
GO:0055029 nuclear DNA-directed RNA polymerase complex 2.04% (2/98) 4.07 0.006484 0.025192
GO:0050896 response to stimulus 10.2% (10/98) 1.33 0.006445 0.025457
GO:1901564 organonitrogen compound metabolic process 16.33% (16/98) 0.98 0.006724 0.025703
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 2.04% (2/98) 4.05 0.006691 0.025783
GO:0016887 ATP hydrolysis activity 4.08% (4/98) 2.43 0.006825 0.02588
GO:0030029 actin filament-based process 2.04% (2/98) 4.02 0.006918 0.026024
GO:0051656 establishment of organelle localization 2.04% (2/98) 4.01 0.006988 0.026083
GO:0003899 DNA-directed 5'-3' RNA polymerase activity 2.04% (2/98) 3.99 0.00722 0.026737
GO:0030619 U1 snRNA binding 1.02% (1/98) 7.09 0.007313 0.02687
GO:0030120 vesicle coat 2.04% (2/98) 3.93 0.007861 0.028662
GO:0030620 U2 snRNA binding 1.02% (1/98) 6.94 0.008122 0.029388
GO:0016779 nucleotidyltransferase activity 3.06% (3/98) 2.87 0.008324 0.029892
GO:0000428 DNA-directed RNA polymerase complex 2.04% (2/98) 3.86 0.008604 0.030436
GO:0071840 cellular component organization or biogenesis 8.16% (8/98) 1.47 0.008602 0.030658
GO:0032940 secretion by cell 2.04% (2/98) 3.83 0.008878 0.030718
GO:0032559 adenyl ribonucleotide binding 13.27% (13/98) 1.07 0.00887 0.030915
GO:0140534 endoplasmic reticulum protein-containing complex 2.04% (2/98) 3.82 0.009017 0.030971
GO:0016192 vesicle-mediated transport 4.08% (4/98) 2.32 0.008829 0.031001
GO:0000956 nuclear-transcribed mRNA catabolic process 2.04% (2/98) 3.8 0.009337 0.031841
GO:0046903 secretion 2.04% (2/98) 3.78 0.00954 0.0323
GO:0006661 phosphatidylinositol biosynthetic process 2.04% (2/98) 3.75 0.009951 0.033218
GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity 1.02% (1/98) 6.65 0.0099 0.03328
GO:0097747 RNA polymerase activity 2.04% (2/98) 3.66 0.011101 0.03654
GO:0034062 5'-3' RNA polymerase activity 2.04% (2/98) 3.66 0.011101 0.03654
GO:0030117 membrane coat 2.04% (2/98) 3.65 0.01132 0.037004
GO:0140352 export from cell 2.04% (2/98) 3.6 0.012033 0.038538
GO:0030554 adenyl nucleotide binding 13.27% (13/98) 1.01 0.012009 0.038722
GO:0030880 RNA polymerase complex 2.04% (2/98) 3.59 0.012237 0.038929
GO:0070536 protein K63-linked deubiquitination 1.02% (1/98) 6.37 0.011997 0.038949
GO:0005856 cytoskeleton 2.04% (2/98) 3.56 0.012673 0.040047
GO:0007015 actin filament organization 2.04% (2/98) 3.54 0.013116 0.041171
GO:0007165 signal transduction 5.1% (5/98) 1.84 0.013546 0.042243
GO:0032555 purine ribonucleotide binding 13.27% (13/98) 0.99 0.013636 0.042246
GO:0051015 actin filament binding 2.04% (2/98) 3.49 0.013973 0.043007
GO:0006402 mRNA catabolic process 2.04% (2/98) 3.48 0.014094 0.043099
GO:0030118 clathrin coat 1.02% (1/98) 6.07 0.014733 0.043647
GO:0030125 clathrin vesicle coat 1.02% (1/98) 6.07 0.014733 0.043647
GO:0043248 proteasome assembly 1.02% (1/98) 6.09 0.014572 0.043717
GO:0032553 ribonucleotide binding 13.27% (13/98) 0.98 0.01451 0.043808
GO:0006066 alcohol metabolic process 2.04% (2/98) 3.46 0.014435 0.043859
GO:0097367 carbohydrate derivative binding 13.27% (13/98) 0.97 0.015362 0.045227
GO:0090304 nucleic acid metabolic process 9.18% (9/98) 1.2 0.016765 0.049053
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (98) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms