Coexpression cluster: Cluster_856 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030176 obsolete integral component of endoplasmic reticulum membrane 4.29% (3/70) 5.87 2e-05 0.002366
GO:0043625 delta DNA polymerase complex 2.86% (2/70) 8.45 1.6e-05 0.002419
GO:0015662 P-type ion transporter activity 4.29% (3/70) 5.43 5.1e-05 0.00264
GO:0140358 P-type transmembrane transporter activity 4.29% (3/70) 5.43 5.1e-05 0.00264
GO:0005575 cellular_component 41.43% (29/70) 1.05 3.4e-05 0.002651
GO:0019725 cellular homeostasis 5.71% (4/70) 4.41 4.1e-05 0.00273
GO:0031969 chloroplast membrane 4.29% (3/70) 5.64 3.3e-05 0.003039
GO:0006874 intracellular calcium ion homeostasis 4.29% (3/70) 6.07 1.4e-05 0.003178
GO:0055074 calcium ion homeostasis 4.29% (3/70) 6.07 1.4e-05 0.003178
GO:0031090 organelle membrane 8.57% (6/70) 3.07 8.4e-05 0.003881
GO:0042592 homeostatic process 5.71% (4/70) 3.94 0.000146 0.005204
GO:0098771 inorganic ion homeostasis 4.29% (3/70) 4.93 0.00014 0.005416
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity 4.29% (3/70) 4.93 0.00014 0.005888
GO:0110165 cellular anatomical entity 35.71% (25/70) 1.01 0.000243 0.008035
GO:0000731 DNA synthesis involved in DNA repair 2.86% (2/70) 6.31 0.000308 0.00952
GO:0030003 intracellular monoatomic cation homeostasis 4.29% (3/70) 4.48 0.000352 0.01019
GO:0006873 intracellular monoatomic ion homeostasis 4.29% (3/70) 4.37 0.000435 0.011841
GO:0035268 protein mannosylation 1.43% (1/70) 10.26 0.000815 0.013978
GO:0035269 protein O-linked mannosylation 1.43% (1/70) 10.26 0.000815 0.013978
GO:0097502 mannosylation 1.43% (1/70) 10.26 0.000815 0.013978
GO:0004582 dolichyl-phosphate beta-D-mannosyltransferase activity 1.43% (1/70) 10.26 0.000815 0.013978
GO:0022853 active monoatomic ion transmembrane transporter activity 4.29% (3/70) 4.04 0.000847 0.01401
GO:0042170 plastid membrane 4.29% (3/70) 4.18 0.000643 0.014178
GO:0055082 intracellular chemical homeostasis 4.29% (3/70) 4.2 0.000619 0.01432
GO:0042575 DNA polymerase complex 2.86% (2/70) 5.83 0.000594 0.014483
GO:0016741 transferase activity, transferring one-carbon groups 5.71% (4/70) 3.23 0.000907 0.014488
GO:0055080 monoatomic cation homeostasis 4.29% (3/70) 4.23 0.000581 0.014948
GO:0008168 methyltransferase activity 5.71% (4/70) 3.29 0.000781 0.015731
GO:0050801 monoatomic ion homeostasis 4.29% (3/70) 4.1 0.000756 0.015905
GO:0017111 ribonucleoside triphosphate phosphatase activity 7.14% (5/70) 2.69 0.00109 0.016823
GO:0071897 DNA biosynthetic process 2.86% (2/70) 5.32 0.001189 0.017759
GO:0043226 organelle 20.0% (14/70) 1.29 0.001396 0.019003
GO:0031410 cytoplasmic vesicle 4.29% (3/70) 3.69 0.001694 0.019133
GO:0097708 intracellular vesicle 4.29% (3/70) 3.69 0.001694 0.019133
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 7.14% (5/70) 2.57 0.001579 0.019241
GO:0016462 pyrophosphatase activity 7.14% (5/70) 2.6 0.001466 0.019392
GO:0010992 ubiquitin recycling 1.43% (1/70) 9.37 0.001513 0.019462
GO:0016817 hydrolase activity, acting on acid anhydrides 7.14% (5/70) 2.56 0.001646 0.019541
GO:0043229 intracellular organelle 20.0% (14/70) 1.29 0.001394 0.01956
GO:0006261 DNA-templated DNA replication 2.86% (2/70) 5.12 0.001569 0.01964
GO:0048878 chemical homeostasis 4.29% (3/70) 3.65 0.001838 0.019786
GO:0005739 mitochondrion 5.71% (4/70) 2.96 0.001805 0.019903
GO:0003887 DNA-directed DNA polymerase activity 2.86% (2/70) 5.21 0.001388 0.020077
GO:0034061 DNA polymerase activity 2.86% (2/70) 4.97 0.001931 0.020317
GO:0016887 ATP hydrolysis activity 5.71% (4/70) 2.91 0.002047 0.021062
GO:1901565 organonitrogen compound catabolic process 5.71% (4/70) 2.89 0.002132 0.021462
GO:0034719 SMN-Sm protein complex 1.43% (1/70) 8.82 0.002211 0.02178
GO:0036464 cytoplasmic ribonucleoprotein granule 2.86% (2/70) 4.83 0.002313 0.022308
GO:0035770 ribonucleoprotein granule 2.86% (2/70) 4.81 0.002381 0.022497
GO:0043186 P granule 1.43% (1/70) 8.68 0.002443 0.022626
GO:0031982 vesicle 4.29% (3/70) 3.43 0.002817 0.025571
GO:0043231 intracellular membrane-bounded organelle 17.14% (12/70) 1.29 0.003282 0.029225
GO:0005742 mitochondrial outer membrane translocase complex 1.43% (1/70) 8.16 0.003489 0.029369
GO:0098799 outer mitochondrial membrane protein complex 1.43% (1/70) 8.16 0.003489 0.029369
GO:0140535 intracellular protein-containing complex 5.71% (4/70) 2.67 0.003685 0.030467
GO:0043227 membrane-bounded organelle 17.14% (12/70) 1.28 0.003488 0.030474
GO:1903513 endoplasmic reticulum to cytosol transport 1.43% (1/70) 8.02 0.003837 0.03063
GO:0030970 retrograde protein transport, ER to cytosol 1.43% (1/70) 8.02 0.003837 0.03063
GO:0032527 protein exit from endoplasmic reticulum 1.43% (1/70) 7.98 0.003953 0.031021
GO:2000641 regulation of early endosome to late endosome transport 1.43% (1/70) 7.71 0.004765 0.03677
GO:0018444 translation release factor complex 1.43% (1/70) 7.61 0.005113 0.038807
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (70) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms