Coexpression cluster: Cluster_5713 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0036361 racemase activity, acting on amino acids and derivatives 25.0% (1/4) 12.5 0.000173 0.001748
GO:0003941 L-serine ammonia-lyase activity 25.0% (1/4) 12.5 0.000173 0.001748
GO:0046416 D-amino acid metabolic process 25.0% (1/4) 12.8 0.00014 0.001765
GO:0047661 amino-acid racemase activity 25.0% (1/4) 12.87 0.000133 0.001921
GO:0018114 threonine racemase activity 25.0% (1/4) 13.03 0.00012 0.002017
GO:0046437 D-amino acid biosynthetic process 25.0% (1/4) 13.03 0.00012 0.002017
GO:0070178 D-serine metabolic process 25.0% (1/4) 13.03 0.00012 0.002017
GO:0070179 D-serine biosynthetic process 25.0% (1/4) 13.03 0.00012 0.002017
GO:0030378 serine racemase activity 25.0% (1/4) 13.03 0.00012 0.002017
GO:0008721 D-serine ammonia-lyase activity 25.0% (1/4) 13.03 0.00012 0.002017
GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives 25.0% (1/4) 12.07 0.000233 0.002139
GO:0032776 DNA methylation on cytosine 25.0% (1/4) 10.75 0.000579 0.004498
GO:0010424 DNA methylation on cytosine within a CG sequence 25.0% (1/4) 10.75 0.000579 0.004498
GO:0010216 obsolete negative regulation of gene expression via chromosomal DNA cytosine methylation 25.0% (1/4) 10.43 0.000725 0.005233
GO:0006306 DNA methylation 25.0% (1/4) 9.91 0.001038 0.005518
GO:0006305 DNA alkylation 25.0% (1/4) 9.91 0.001038 0.005518
GO:0016841 ammonia-lyase activity 25.0% (1/4) 9.97 0.000998 0.00593
GO:0003886 DNA (cytosine-5-)-methyltransferase activity 25.0% (1/4) 10.04 0.000952 0.006006
GO:0009008 DNA-methyltransferase activity 25.0% (1/4) 10.04 0.000952 0.006006
GO:0016854 racemase and epimerase activity 25.0% (1/4) 8.8 0.002235 0.010259
GO:0016840 carbon-nitrogen lyase activity 25.0% (1/4) 8.84 0.002181 0.010492
GO:0006304 DNA modification 25.0% (1/4) 8.85 0.002168 0.010949
GO:0009070 serine family amino acid biosynthetic process 25.0% (1/4) 8.33 0.003098 0.013605
GO:0009069 serine family amino acid metabolic process 25.0% (1/4) 8.09 0.003669 0.015441
GO:0070279 vitamin B6 binding 25.0% (1/4) 7.48 0.005573 0.021649
GO:0030170 pyridoxal phosphate binding 25.0% (1/4) 7.48 0.005573 0.021649
GO:0019842 vitamin binding 25.0% (1/4) 7.16 0.006951 0.026002
GO:0000287 magnesium ion binding 25.0% (1/4) 7.07 0.007441 0.02684
GO:1901607 alpha-amino acid biosynthetic process 25.0% (1/4) 6.6 0.010238 0.035656
GO:0008652 amino acid biosynthetic process 25.0% (1/4) 6.49 0.011063 0.037246
GO:0043414 macromolecule methylation 25.0% (1/4) 6.39 0.011881 0.038711
GO:0003682 chromatin binding 25.0% (1/4) 6.22 0.013358 0.042162
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity 25.0% (1/4) 6.17 0.013787 0.042196
GO:0032259 methylation 25.0% (1/4) 6.0 0.015525 0.046117
GO:1901605 alpha-amino acid metabolic process 25.0% (1/4) 5.93 0.016287 0.047001
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms