Coexpression cluster: Cluster_9621 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0048026 positive regulation of mRNA splicing, via spliceosome 50.0% (2/4) 11.74 0.0 2e-06
GO:0033120 positive regulation of RNA splicing 50.0% (2/4) 11.74 0.0 2e-06
GO:0050685 positive regulation of mRNA processing 50.0% (2/4) 11.74 0.0 2e-06
GO:0048024 regulation of mRNA splicing, via spliceosome 50.0% (2/4) 10.4 1e-06 1.2e-05
GO:0050684 regulation of mRNA processing 50.0% (2/4) 10.13 1e-06 1.4e-05
GO:0043484 regulation of RNA splicing 50.0% (2/4) 9.95 2e-06 1.5e-05
GO:0010628 positive regulation of gene expression 50.0% (2/4) 9.56 3e-06 1.7e-05
GO:1903313 positive regulation of mRNA metabolic process 50.0% (2/4) 9.72 2e-06 1.7e-05
GO:1990542 mitochondrial transmembrane transport 50.0% (2/4) 9.61 2e-06 1.8e-05
GO:1903311 regulation of mRNA metabolic process 50.0% (2/4) 9.08 5e-06 3e-05
GO:0006839 mitochondrial transport 50.0% (2/4) 8.83 7e-06 3.8e-05
GO:0005681 spliceosomal complex 50.0% (2/4) 7.64 3.8e-05 0.000181
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 50.0% (2/4) 6.98 9.3e-05 0.000317
GO:0010557 positive regulation of macromolecule biosynthetic process 50.0% (2/4) 7.02 8.8e-05 0.000319
GO:0009891 positive regulation of biosynthetic process 50.0% (2/4) 7.02 8.8e-05 0.000319
GO:0031328 positive regulation of cellular biosynthetic process 50.0% (2/4) 7.02 8.8e-05 0.000319
GO:0051254 positive regulation of RNA metabolic process 50.0% (2/4) 7.06 8.3e-05 0.000372
GO:0031325 positive regulation of cellular metabolic process 50.0% (2/4) 6.71 0.000135 0.000436
GO:0009893 positive regulation of metabolic process 50.0% (2/4) 6.49 0.000183 0.000483
GO:0010604 positive regulation of macromolecule metabolic process 50.0% (2/4) 6.49 0.000183 0.000506
GO:0051173 positive regulation of nitrogen compound metabolic process 50.0% (2/4) 6.51 0.000178 0.000517
GO:0048522 positive regulation of cellular process 50.0% (2/4) 6.54 0.000173 0.000527
GO:0048518 positive regulation of biological process 50.0% (2/4) 6.28 0.000248 0.000625
GO:0005739 mitochondrion 50.0% (2/4) 6.09 0.00032 0.000773
GO:1990904 ribonucleoprotein complex 50.0% (2/4) 5.86 0.000438 0.001015
GO:0140513 nuclear protein-containing complex 50.0% (2/4) 5.07 0.001308 0.002918
GO:0005575 cellular_component 100.0% (4/4) 2.32 0.001597 0.003432
GO:0055085 transmembrane transport 50.0% (2/4) 4.62 0.002403 0.004978
GO:0003723 RNA binding 50.0% (2/4) 4.5 0.002827 0.005654
GO:0051252 regulation of RNA metabolic process 50.0% (2/4) 4.35 0.0035 0.006766
GO:0019219 regulation of nucleobase-containing compound metabolic process 50.0% (2/4) 4.29 0.003782 0.007076
GO:0080090 regulation of primary metabolic process 50.0% (2/4) 4.1 0.004921 0.008649
GO:0051171 regulation of nitrogen compound metabolic process 50.0% (2/4) 4.11 0.004831 0.008756
GO:0009889 regulation of biosynthetic process 50.0% (2/4) 3.98 0.005754 0.00902
GO:0008150 biological_process 100.0% (4/4) 1.85 0.005987 0.009139
GO:0010556 regulation of macromolecule biosynthetic process 50.0% (2/4) 4.01 0.00555 0.009197
GO:0031326 regulation of cellular biosynthetic process 50.0% (2/4) 3.98 0.005746 0.009258
GO:0010468 regulation of gene expression 50.0% (2/4) 4.02 0.005477 0.009343
GO:0031323 regulation of cellular metabolic process 50.0% (2/4) 3.87 0.006709 0.009729
GO:0060255 regulation of macromolecule metabolic process 50.0% (2/4) 3.88 0.006631 0.009861
GO:0019222 regulation of metabolic process 50.0% (2/4) 3.82 0.007137 0.010096
GO:0006810 transport 50.0% (2/4) 3.75 0.007859 0.010853
GO:0051234 establishment of localization 50.0% (2/4) 3.69 0.008576 0.011568
GO:0051179 localization 50.0% (2/4) 3.63 0.009212 0.012143
GO:0032991 protein-containing complex 50.0% (2/4) 3.43 0.012082 0.015572
GO:0050794 regulation of cellular process 50.0% (2/4) 3.31 0.01424 0.017955
GO:0050789 regulation of biological process 50.0% (2/4) 3.24 0.01566 0.019325
GO:0065007 biological regulation 50.0% (2/4) 3.14 0.017952 0.021692
GO:0003676 nucleic acid binding 50.0% (2/4) 2.93 0.023711 0.028066
GO:0043227 membrane-bounded organelle 50.0% (2/4) 2.82 0.027213 0.030948
GO:0043231 intracellular membrane-bounded organelle 50.0% (2/4) 2.83 0.026827 0.031119
GO:0043226 organelle 50.0% (2/4) 2.62 0.0357 0.039068
GO:0043229 intracellular organelle 50.0% (2/4) 2.62 0.035693 0.039812
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms