Coexpression cluster: Cluster_2538 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0008442 3-hydroxyisobutyrate dehydrogenase activity 8.33% (1/12) 12.29 0.0002 0.023362
GO:0005849 mRNA cleavage factor complex 8.33% (1/12) 7.88 0.004225 0.02908
GO:0000993 RNA polymerase II complex binding 8.33% (1/12) 7.97 0.003987 0.029152
GO:0070063 RNA polymerase binding 8.33% (1/12) 7.48 0.005577 0.02966
GO:0006553 lysine metabolic process 8.33% (1/12) 8.0 0.003907 0.030474
GO:0009085 lysine biosynthetic process 8.33% (1/12) 8.0 0.003907 0.030474
GO:0009089 lysine biosynthetic process via diaminopimelate 8.33% (1/12) 8.44 0.002872 0.030545
GO:0046451 diaminopimelate metabolic process 8.33% (1/12) 8.44 0.002872 0.030545
GO:0001099 basal RNA polymerase II transcription machinery binding 8.33% (1/12) 7.31 0.006292 0.030674
GO:0001098 basal transcription machinery binding 8.33% (1/12) 7.31 0.006292 0.030674
GO:0016774 phosphotransferase activity, carboxyl group as acceptor 8.33% (1/12) 7.49 0.005537 0.030851
GO:0006378 mRNA polyadenylation 8.33% (1/12) 7.55 0.005319 0.031115
GO:0043175 RNA polymerase core enzyme binding 8.33% (1/12) 7.68 0.004882 0.03173
GO:0009083 branched-chain amino acid catabolic process 8.33% (1/12) 7.6 0.00516 0.031773
GO:0006520 amino acid metabolic process 16.67% (2/12) 4.43 0.003729 0.033561
GO:0006573 valine metabolic process 8.33% (1/12) 8.15 0.003509 0.034212
GO:0009092 homoserine metabolic process 8.33% (1/12) 8.56 0.002653 0.034485
GO:0006353 DNA-templated transcription termination 8.33% (1/12) 9.66 0.001237 0.036194
GO:0031124 mRNA 3'-end processing 8.33% (1/12) 6.95 0.008038 0.037617
GO:0019202 amino acid kinase activity 8.33% (1/12) 8.59 0.002593 0.037921
GO:0006574 valine catabolic process 8.33% (1/12) 8.59 0.002593 0.037921
GO:0009081 branched-chain amino acid metabolic process 8.33% (1/12) 6.87 0.008533 0.0384
GO:0009067 aspartate family amino acid biosynthetic process 8.33% (1/12) 6.74 0.009345 0.03905
GO:0009070 serine family amino acid biosynthetic process 8.33% (1/12) 6.75 0.009266 0.040153
GO:0004072 aspartate kinase activity 8.33% (1/12) 8.91 0.002075 0.040459
GO:1901605 alpha-amino acid metabolic process 16.67% (2/12) 5.35 0.001078 0.042025
GO:0009090 homoserine biosynthetic process 8.33% (1/12) 9.09 0.001836 0.042953
GO:0009069 serine family amino acid metabolic process 8.33% (1/12) 6.5 0.010967 0.044248
GO:0006082 organic acid metabolic process 16.67% (2/12) 3.51 0.012781 0.045315
GO:0009066 aspartate family amino acid metabolic process 8.33% (1/12) 6.38 0.011936 0.046549
GO:0043436 oxoacid metabolic process 16.67% (2/12) 3.51 0.012762 0.046661
GO:0019752 carboxylic acid metabolic process 16.67% (2/12) 3.52 0.012693 0.047905
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (12) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms