Coexpression cluster: Cluster_658 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0010150 leaf senescence 2.3% (6/261) 7.67 0.0 0.0
GO:0090693 plant organ senescence 2.3% (6/261) 7.67 0.0 0.0
GO:0062197 cellular response to chemical stress 2.3% (6/261) 5.73 0.0 0.0
GO:0034599 cellular response to oxidative stress 2.3% (6/261) 5.76 0.0 0.0
GO:0033120 positive regulation of RNA splicing 1.53% (4/261) 6.71 0.0 5e-06
GO:0048026 positive regulation of mRNA splicing, via spliceosome 1.53% (4/261) 6.71 0.0 5e-06
GO:0050685 positive regulation of mRNA processing 1.53% (4/261) 6.71 0.0 5e-06
GO:0070887 cellular response to chemical stimulus 2.3% (6/261) 4.75 0.0 7e-06
GO:0044183 protein folding chaperone 2.68% (7/261) 4.05 0.0 1.5e-05
GO:0000774 adenyl-nucleotide exchange factor activity 1.53% (4/261) 6.12 0.0 1.9e-05
GO:0060590 ATPase regulator activity 1.53% (4/261) 5.48 2e-06 9.1e-05
GO:0140662 ATP-dependent protein folding chaperone 2.3% (6/261) 4.04 2e-06 9.6e-05
GO:0048024 regulation of mRNA splicing, via spliceosome 1.53% (4/261) 5.37 3e-06 0.000113
GO:0009507 chloroplast 3.83% (10/261) 2.66 6e-06 0.000173
GO:0006979 response to oxidative stress 2.68% (7/261) 3.41 6e-06 0.000182
GO:0050684 regulation of mRNA processing 1.53% (4/261) 5.1 7e-06 0.000193
GO:0009536 plastid 3.83% (10/261) 2.62 7e-06 0.000193
GO:1904423 dehydrodolichyl diphosphate synthase complex 0.77% (2/261) 8.85 8e-06 0.000217
GO:0043484 regulation of RNA splicing 1.53% (4/261) 4.92 1.1e-05 0.000266
GO:1903313 positive regulation of mRNA metabolic process 1.53% (4/261) 4.69 2e-05 0.000446
GO:0019408 dolichol biosynthetic process 0.77% (2/261) 8.26 2e-05 0.000454
GO:0010628 positive regulation of gene expression 1.53% (4/261) 4.53 3.2e-05 0.000664
GO:0120029 proton export across plasma membrane 0.77% (2/261) 7.47 6.1e-05 0.001121
GO:0047453 ATP-dependent NAD(P)H-hydrate dehydratase activity 0.77% (2/261) 7.47 6.1e-05 0.001121
GO:0110051 metabolite repair 0.77% (2/261) 7.47 6.1e-05 0.001121
GO:0032502 developmental process 2.68% (7/261) 2.85 6.5e-05 0.001149
GO:1903311 regulation of mRNA metabolic process 1.53% (4/261) 4.05 0.000113 0.001928
GO:0045547 dehydrodolichyl diphosphate synthase activity 0.77% (2/261) 6.96 0.000124 0.002044
GO:0016094 polyprenol biosynthetic process 0.77% (2/261) 6.58 0.000209 0.003333
GO:0042221 response to chemical 2.68% (7/261) 2.45 0.000343 0.005284
GO:0019374 galactolipid metabolic process 0.77% (2/261) 5.94 0.000511 0.006741
GO:0019375 galactolipid biosynthetic process 0.77% (2/261) 5.94 0.000511 0.006741
GO:0035250 UDP-galactosyltransferase activity 0.77% (2/261) 5.94 0.000511 0.006741
GO:0046481 digalactosyldiacylglycerol synthase activity 0.77% (2/261) 5.94 0.000511 0.006741
GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity 1.53% (4/261) 3.45 0.000544 0.006977
GO:0005681 spliceosomal complex 1.92% (5/261) 2.93 0.000562 0.007014
GO:0009505 plant-type cell wall 1.53% (4/261) 3.49 0.000495 0.007375
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.83% (10/261) 1.8 0.000742 0.009024
GO:0007623 circadian rhythm 0.77% (2/261) 5.36 0.001132 0.01245
GO:0048511 rhythmic process 0.77% (2/261) 5.36 0.001132 0.01245
GO:0140352 export from cell 1.53% (4/261) 3.19 0.001061 0.012567
GO:0009640 photomorphogenesis 0.77% (2/261) 5.39 0.001092 0.012615
GO:0016462 pyrophosphatase activity 3.83% (10/261) 1.7 0.001227 0.013181
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.83% (10/261) 1.67 0.00139 0.014598
GO:0016817 hydrolase activity, acting on acid anhydrides 3.83% (10/261) 1.66 0.00149 0.015301
GO:0140115 export across plasma membrane 0.77% (2/261) 4.95 0.001986 0.019951
GO:0019348 dolichol metabolic process 0.77% (2/261) 4.9 0.002119 0.020834
GO:0008553 P-type proton-exporting transporter activity 0.77% (2/261) 4.8 0.002426 0.023355
GO:0005618 cell wall 1.53% (4/261) 2.83 0.002596 0.024476
GO:0030312 external encapsulating structure 1.53% (4/261) 2.79 0.002925 0.027026
GO:0016093 polyprenol metabolic process 0.77% (2/261) 4.62 0.003099 0.028077
GO:0009639 response to red or far red light 0.77% (2/261) 4.54 0.003465 0.030784
GO:0016887 ATP hydrolysis activity 2.68% (7/261) 1.82 0.004144 0.034806
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 2.68% (7/261) 1.82 0.00411 0.03516
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 1.92% (5/261) 2.28 0.004043 0.035244
GO:0022853 active monoatomic ion transmembrane transporter activity 1.53% (4/261) 2.56 0.005104 0.042104
GO:0008378 galactosyltransferase activity 0.77% (2/261) 4.19 0.005533 0.044845
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (261) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms