Coexpression cluster: Cluster_143 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009607 response to biotic stimulus 7.97% (24/301) 2.0 0.0 1e-06
GO:0044419 biological process involved in interspecies interaction between organisms 7.97% (24/301) 2.0 0.0 2e-06
GO:0043207 response to external biotic stimulus 7.97% (24/301) 2.0 0.0 2e-06
GO:0006952 defense response 7.97% (24/301) 1.92 0.0 3e-06
GO:0009605 response to external stimulus 7.97% (24/301) 1.91 0.0 3e-06
GO:0098542 defense response to other organism 7.97% (24/301) 2.0 0.0 3e-06
GO:0051707 response to other organism 7.97% (24/301) 2.0 0.0 3e-06
GO:0043531 ADP binding 5.98% (18/301) 2.08 0.0 2.5e-05
GO:0051219 phosphoprotein binding 1.0% (3/301) 7.09 2e-06 5.8e-05
GO:0045309 protein phosphorylated amino acid binding 1.0% (3/301) 7.09 2e-06 5.8e-05
GO:0050815 phosphoserine residue binding 1.0% (3/301) 7.12 2e-06 6.4e-05
GO:0099122 RNA polymerase II C-terminal domain binding 1.0% (3/301) 7.12 2e-06 6.4e-05
GO:1990269 RNA polymerase II C-terminal domain phosphoserine binding 1.0% (3/301) 7.12 2e-06 6.4e-05
GO:0016593 Cdc73/Paf1 complex 1.0% (3/301) 5.9 1.9e-05 0.000643
GO:0006950 response to stress 8.64% (26/301) 1.27 4.1e-05 0.001272
GO:0050896 response to stimulus 9.3% (28/301) 1.2 4.7e-05 0.00135
GO:0032559 adenyl ribonucleotide binding 12.29% (37/301) 0.96 9.5e-05 0.002597
GO:0000993 RNA polymerase II complex binding 1.0% (3/301) 4.9 0.000152 0.003915
GO:0032968 positive regulation of transcription elongation by RNA polymerase II 1.0% (3/301) 4.79 0.000193 0.004714
GO:0034243 regulation of transcription elongation by RNA polymerase II 1.0% (3/301) 4.73 0.000215 0.004742
GO:0030554 adenyl nucleotide binding 12.29% (37/301) 0.9 0.000204 0.004743
GO:0006368 transcription elongation by RNA polymerase II 1.0% (3/301) 4.7 0.000232 0.00489
GO:0032555 purine ribonucleotide binding 12.29% (37/301) 0.88 0.000281 0.005219
GO:0043175 RNA polymerase core enzyme binding 1.0% (3/301) 4.61 0.000275 0.005324
GO:0006354 DNA-templated transcription elongation 1.0% (3/301) 4.62 0.000269 0.005424
GO:0032553 ribonucleotide binding 12.29% (37/301) 0.87 0.000328 0.005862
GO:0097367 carbohydrate derivative binding 12.29% (37/301) 0.86 0.000379 0.006508
GO:0070063 RNA polymerase binding 1.0% (3/301) 4.42 0.000406 0.006734
GO:0001098 basal transcription machinery binding 1.0% (3/301) 4.24 0.000577 0.008639
GO:0001099 basal RNA polymerase II transcription machinery binding 1.0% (3/301) 4.24 0.000577 0.008639
GO:0017076 purine nucleotide binding 12.29% (37/301) 0.82 0.000576 0.009221
GO:0032786 positive regulation of DNA-templated transcription, elongation 1.0% (3/301) 4.12 0.000744 0.010783
GO:0043168 anion binding 12.62% (38/301) 0.77 0.000945 0.013291
GO:0043139 5'-3' DNA helicase activity 0.66% (2/301) 5.44 0.001016 0.013865
GO:0008023 transcription elongation factor complex 1.0% (3/301) 3.94 0.001058 0.014022
GO:0032784 regulation of DNA-templated transcription elongation 1.0% (3/301) 3.83 0.001325 0.016179
GO:1901265 nucleoside phosphate binding 12.29% (37/301) 0.76 0.001298 0.016279
GO:0000166 nucleotide binding 12.29% (37/301) 0.76 0.001298 0.016279
GO:1901363 heterocyclic compound binding 12.29% (37/301) 0.72 0.00207 0.024633
GO:0036094 small molecule binding 12.29% (37/301) 0.71 0.002318 0.026888
GO:0004803 transposase activity 0.66% (2/301) 4.75 0.002592 0.029332
GO:0006313 DNA transposition 0.66% (2/301) 4.71 0.002766 0.030558
GO:0016570 histone modification 1.33% (4/301) 2.73 0.003359 0.036249
GO:0043167 ion binding 15.28% (46/301) 0.57 0.004438 0.046796
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (301) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms