Coexpression cluster: Cluster_788 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0071840 cellular component organization or biogenesis 18.18% (16/88) 2.62 0.0 2e-06
GO:0097361 CIA complex 3.41% (3/88) 8.62 0.0 1.2e-05
GO:0097428 protein maturation by iron-sulfur cluster transfer 3.41% (3/88) 7.71 0.0 4.2e-05
GO:0016043 cellular component organization 14.77% (13/88) 2.48 1e-06 4.2e-05
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity 3.41% (3/88) 7.77 0.0 4.9e-05
GO:0042285 xylosyltransferase activity 3.41% (3/88) 7.32 1e-06 6.2e-05
GO:0010413 glucuronoxylan metabolic process 3.41% (3/88) 7.14 1e-06 6.8e-05
GO:0010417 glucuronoxylan biosynthetic process 3.41% (3/88) 7.14 1e-06 6.8e-05
GO:0032777 piccolo histone acetyltransferase complex 2.27% (2/88) 9.35 4e-06 0.00018
GO:0015020 glucuronosyltransferase activity 3.41% (3/88) 6.56 5e-06 0.000182
GO:0032483 regulation of Rab protein signal transduction 2.27% (2/88) 9.09 6e-06 0.000211
GO:0000139 Golgi membrane 4.55% (4/88) 5.01 8e-06 0.000257
GO:0031163 metallo-sulfur cluster assembly 3.41% (3/88) 6.08 1.3e-05 0.000308
GO:0016226 iron-sulfur cluster assembly 3.41% (3/88) 6.08 1.3e-05 0.000308
GO:0045492 xylan biosynthetic process 3.41% (3/88) 6.18 1.1e-05 0.000309
GO:0009834 plant-type secondary cell wall biogenesis 3.41% (3/88) 6.11 1.3e-05 0.000328
GO:0043564 Ku70:Ku80 complex 2.27% (2/88) 8.18 2.3e-05 0.00049
GO:0045491 xylan metabolic process 3.41% (3/88) 5.52 4.3e-05 0.000874
GO:0016763 pentosyltransferase activity 3.41% (3/88) 5.46 4.8e-05 0.00093
GO:0003684 damaged DNA binding 3.41% (3/88) 5.36 6e-05 0.001088
GO:0070592 cell wall polysaccharide biosynthetic process 3.41% (3/88) 5.19 8.5e-05 0.001286
GO:0046578 regulation of Ras protein signal transduction 2.27% (2/88) 7.26 8.2e-05 0.001307
GO:0051056 regulation of small GTPase mediated signal transduction 2.27% (2/88) 7.26 8.2e-05 0.001307
GO:0005515 protein binding 20.45% (18/88) 1.45 8.1e-05 0.0014
GO:0010410 hemicellulose metabolic process 3.41% (3/88) 4.92 0.000144 0.002105
GO:0023051 regulation of signaling 3.41% (3/88) 4.71 0.000223 0.002719
GO:0010646 regulation of cell communication 3.41% (3/88) 4.71 0.000223 0.002802
GO:0009966 regulation of signal transduction 3.41% (3/88) 4.72 0.000219 0.002849
GO:0032991 protein-containing complex 14.77% (13/88) 1.67 0.000206 0.002894
GO:0010383 cell wall polysaccharide metabolic process 3.41% (3/88) 4.72 0.000216 0.002921
GO:0051604 protein maturation 3.41% (3/88) 4.62 0.00027 0.003075
GO:0006996 organelle organization 7.95% (7/88) 2.49 0.000262 0.003087
GO:0043189 H4/H2A histone acetyltransferase complex 2.27% (2/88) 6.29 0.000314 0.00337
GO:0035267 NuA4 histone acetyltransferase complex 2.27% (2/88) 6.29 0.000314 0.00337
GO:0044036 cell wall macromolecule metabolic process 3.41% (3/88) 4.49 0.000349 0.003645
GO:0009832 plant-type cell wall biogenesis 3.41% (3/88) 4.33 0.000476 0.0047
GO:1902562 H4 histone acetyltransferase complex 2.27% (2/88) 6.01 0.000465 0.004712
GO:1902531 regulation of intracellular signal transduction 2.27% (2/88) 5.83 0.000594 0.005709
GO:0005575 cellular_component 35.23% (31/88) 0.82 0.000624 0.005836
GO:0071669 plant-type cell wall organization or biogenesis 3.41% (3/88) 4.12 0.000725 0.006451
GO:0042546 cell wall biogenesis 3.41% (3/88) 4.09 0.00077 0.006535
GO:0022607 cellular component assembly 5.68% (5/88) 2.82 0.000758 0.006588
GO:0006303 double-strand break repair via nonhomologous end joining 2.27% (2/88) 5.69 0.000723 0.0066
GO:0009982 pseudouridine synthase activity 2.27% (2/88) 5.39 0.001089 0.009034
GO:0001522 pseudouridine synthesis 2.27% (2/88) 5.33 0.001183 0.009596
GO:0140535 intracellular protein-containing complex 5.68% (5/88) 2.67 0.001218 0.009661
GO:0048583 regulation of response to stimulus 3.41% (3/88) 3.82 0.001323 0.010274
GO:0042162 telomeric DNA binding 2.27% (2/88) 5.12 0.001566 0.011905
GO:0000271 polysaccharide biosynthetic process 3.41% (3/88) 3.63 0.001915 0.014268
GO:0005875 microtubule associated complex 2.27% (2/88) 4.94 0.002017 0.014723
GO:0006302 double-strand break repair 3.41% (3/88) 3.55 0.002246 0.016076
GO:0000123 histone acetyltransferase complex 2.27% (2/88) 4.78 0.002493 0.017498
GO:0071554 cell wall organization or biogenesis 3.41% (3/88) 3.48 0.002583 0.017788
GO:0044085 cellular component biogenesis 3.41% (3/88) 3.46 0.002695 0.018216
GO:0006357 regulation of transcription by RNA polymerase II 4.55% (4/88) 2.78 0.002891 0.019186
GO:0098588 bounding membrane of organelle 4.55% (4/88) 2.74 0.003149 0.020527
GO:1902493 acetyltransferase complex 2.27% (2/88) 4.55 0.003392 0.021347
GO:0031248 protein acetyltransferase complex 2.27% (2/88) 4.55 0.003392 0.021347
GO:0015136 sialic acid transmembrane transporter activity 1.14% (1/88) 8.04 0.003801 0.022741
GO:0006790 sulfur compound metabolic process 3.41% (3/88) 3.3 0.00368 0.022764
GO:0009987 cellular process 30.68% (27/88) 0.74 0.003744 0.022778
GO:0050794 regulation of cellular process 12.5% (11/88) 1.31 0.004732 0.027857
GO:0016051 carbohydrate biosynthetic process 3.41% (3/88) 3.15 0.004888 0.028317
GO:0031982 vesicle 3.41% (3/88) 3.1 0.005356 0.030544
GO:0071782 endoplasmic reticulum tubular network 1.14% (1/88) 7.42 0.005841 0.030898
GO:0098827 endoplasmic reticulum subcompartment 1.14% (1/88) 7.42 0.005841 0.030898
GO:0005976 polysaccharide metabolic process 3.41% (3/88) 3.05 0.005948 0.031015
GO:0032200 telomere organization 2.27% (2/88) 4.16 0.005748 0.031312
GO:0000723 telomere maintenance 2.27% (2/88) 4.16 0.005748 0.031312
GO:0007051 spindle organization 2.27% (2/88) 4.18 0.005589 0.031385
GO:0050789 regulation of biological process 12.5% (11/88) 1.24 0.006784 0.034874
GO:0071786 endoplasmic reticulum tubular network organization 1.14% (1/88) 7.06 0.007441 0.037724
GO:0000455 enzyme-directed rRNA pseudouridine synthesis 1.14% (1/88) 7.04 0.007587 0.037934
GO:0051276 chromosome organization 3.41% (3/88) 2.87 0.008246 0.040673
GO:0035091 phosphatidylinositol binding 2.27% (2/88) 3.83 0.008893 0.04328
GO:0016866 intramolecular transferase activity 2.27% (2/88) 3.78 0.009486 0.04556
GO:0000244 spliceosomal tri-snRNP complex assembly 1.14% (1/88) 6.69 0.00962 0.0456
GO:0005687 U4 snRNP 1.14% (1/88) 6.65 0.00991 0.046372
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (88) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms