Coexpression cluster: Cluster_686 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000938 GARP complex 5.0% (5/100) 7.86 0.0 0.0
GO:0007034 vacuolar transport 7.0% (7/100) 5.85 0.0 0.0
GO:0032456 endocytic recycling 5.0% (5/100) 7.99 0.0 0.0
GO:0006896 Golgi to vacuole transport 5.0% (5/100) 7.33 0.0 0.0
GO:0005515 protein binding 28.0% (28/100) 1.9 0.0 0.0
GO:0019905 syntaxin binding 5.0% (5/100) 6.77 0.0 0.0
GO:0042147 retrograde transport, endosome to Golgi 5.0% (5/100) 6.62 0.0 0.0
GO:0016482 cytosolic transport 5.0% (5/100) 6.41 0.0 0.0
GO:0098876 vesicle-mediated transport to the plasma membrane 5.0% (5/100) 6.31 0.0 0.0
GO:0016197 endosomal transport 6.0% (6/100) 5.35 0.0 1e-06
GO:0006892 post-Golgi vesicle-mediated transport 5.0% (5/100) 6.06 0.0 1e-06
GO:0046907 intracellular transport 10.0% (10/100) 3.43 0.0 1e-06
GO:0061863 microtubule plus end polymerase 3.0% (3/100) 8.93 0.0 1e-06
GO:0030951 establishment or maintenance of microtubule cytoskeleton polarity 3.0% (3/100) 8.93 0.0 1e-06
GO:0030952 establishment or maintenance of cytoskeleton polarity 3.0% (3/100) 8.93 0.0 1e-06
GO:0046785 microtubule polymerization 3.0% (3/100) 8.89 0.0 1e-06
GO:0051649 establishment of localization in cell 10.0% (10/100) 3.38 0.0 2e-06
GO:0051668 localization within membrane 6.0% (6/100) 4.8 0.0 3e-06
GO:0005575 cellular_component 43.0% (43/100) 1.1 0.0 4e-06
GO:0000149 SNARE binding 5.0% (5/100) 5.3 0.0 5e-06
GO:0035371 microtubule plus-end 3.0% (3/100) 8.05 0.0 5e-06
GO:1990752 microtubule end 3.0% (3/100) 8.05 0.0 5e-06
GO:0051010 microtubule plus-end binding 3.0% (3/100) 8.05 0.0 5e-06
GO:0032991 protein-containing complex 18.0% (18/100) 1.96 1e-06 1.7e-05
GO:0008150 biological_process 51.0% (51/100) 0.87 1e-06 1.7e-05
GO:0048193 Golgi vesicle transport 6.0% (6/100) 4.23 1e-06 1.9e-05
GO:0051641 cellular localization 10.0% (10/100) 2.92 1e-06 2e-05
GO:0007163 establishment or maintenance of cell polarity 3.0% (3/100) 7.14 2e-06 2.8e-05
GO:0005488 binding 44.0% (44/100) 0.96 2e-06 3e-05
GO:0006996 organelle organization 10.0% (10/100) 2.82 2e-06 3e-05
GO:0016192 vesicle-mediated transport 8.0% (8/100) 3.29 2e-06 3.3e-05
GO:0051258 protein polymerization 3.0% (3/100) 6.99 2e-06 3.4e-05
GO:0000922 spindle pole 3.0% (3/100) 6.97 2e-06 3.4e-05
GO:0099023 vesicle tethering complex 5.0% (5/100) 4.61 2e-06 3.5e-05
GO:0016043 cellular component organization 13.0% (13/100) 2.3 3e-06 3.9e-05
GO:0031109 microtubule polymerization or depolymerization 3.0% (3/100) 6.78 3e-06 4.6e-05
GO:0000776 kinetochore 3.0% (3/100) 6.46 6e-06 8.8e-05
GO:0071840 cellular component organization or biogenesis 13.0% (13/100) 2.14 8e-06 0.000114
GO:0051179 localization 15.0% (15/100) 1.9 1.2e-05 0.000157
GO:0006810 transport 14.0% (14/100) 1.92 2e-05 0.000269
GO:0003682 chromatin binding 5.0% (5/100) 3.9 2.4e-05 0.000315
GO:0051234 establishment of localization 14.0% (14/100) 1.85 3.3e-05 0.000418
GO:0007052 mitotic spindle organization 3.0% (3/100) 5.52 4.2e-05 0.000509
GO:0007062 sister chromatid cohesion 3.0% (3/100) 5.53 4.2e-05 0.000509
GO:0003674 molecular_function 55.0% (55/100) 0.64 4.7e-05 0.000548
GO:1902850 microtubule cytoskeleton organization involved in mitosis 3.0% (3/100) 5.43 5.2e-05 0.00058
GO:0005813 centrosome 3.0% (3/100) 5.43 5.1e-05 0.000585
GO:0009987 cellular process 35.0% (35/100) 0.93 6.3e-05 0.00069
GO:0005815 microtubule organizing center 3.0% (3/100) 5.25 7.4e-05 0.000796
GO:0022402 cell cycle process 6.0% (6/100) 3.02 0.000108 0.001139
GO:0051276 chromosome organization 5.0% (5/100) 3.42 0.000114 0.001176
GO:0043226 organelle 20.0% (20/100) 1.29 0.00015 0.001489
GO:0043229 intracellular organelle 20.0% (20/100) 1.29 0.00015 0.001515
GO:0110165 cellular anatomical entity 33.0% (33/100) 0.9 0.000159 0.001551
GO:0005662 DNA replication factor A complex 2.0% (2/100) 6.34 0.000294 0.002762
GO:0007051 spindle organization 3.0% (3/100) 4.58 0.000289 0.002773
GO:2001070 starch binding 2.0% (2/100) 6.14 0.000391 0.003617
GO:0006278 RNA-templated DNA biosynthetic process 2.0% (2/100) 6.0 0.000472 0.004218
GO:0007004 telomere maintenance via telomerase 2.0% (2/100) 6.0 0.000472 0.004218
GO:0043047 single-stranded telomeric DNA binding 2.0% (2/100) 5.95 0.000503 0.004272
GO:0098847 sequence-specific single stranded DNA binding 2.0% (2/100) 5.95 0.000503 0.004272
GO:0007064 mitotic sister chromatid cohesion 2.0% (2/100) 5.97 0.000492 0.004325
GO:0010833 telomere maintenance via telomere lengthening 2.0% (2/100) 5.71 0.000698 0.005841
GO:0043175 RNA polymerase core enzyme binding 2.0% (2/100) 5.62 0.000798 0.006572
GO:0015421 ABC-type oligopeptide transporter activity 2.0% (2/100) 5.57 0.00085 0.006591
GO:0015440 ABC-type peptide transporter activity 2.0% (2/100) 5.57 0.00085 0.006591
GO:0007008 outer mitochondrial membrane organization 1.0% (1/100) 10.23 0.000832 0.006642
GO:0045040 protein insertion into mitochondrial outer membrane 1.0% (1/100) 10.23 0.000832 0.006642
GO:0044877 protein-containing complex binding 5.0% (5/100) 2.77 0.000893 0.006823
GO:0000724 double-strand break repair via homologous recombination 3.0% (3/100) 3.97 0.000984 0.00741
GO:0070063 RNA polymerase binding 2.0% (2/100) 5.42 0.001039 0.007712
GO:0051321 meiotic cell cycle 2.0% (2/100) 5.4 0.001076 0.007875
GO:0006281 DNA repair 5.0% (5/100) 2.68 0.001177 0.008159
GO:0018738 S-formylglutathione hydrolase activity 1.0% (1/100) 9.75 0.001164 0.008181
GO:0000725 recombinational repair 3.0% (3/100) 3.9 0.001138 0.008219
GO:0003697 single-stranded DNA binding 3.0% (3/100) 3.89 0.00116 0.008262
GO:0005634 nucleus 11.0% (11/100) 1.57 0.001207 0.008262
GO:0033554 cellular response to stress 6.0% (6/100) 2.31 0.001417 0.009574
GO:0006260 DNA replication 3.0% (3/100) 3.78 0.001446 0.009649
GO:0004694 eukaryotic translation initiation factor 2alpha kinase activity 1.0% (1/100) 9.38 0.001497 0.009859
GO:0043231 intracellular membrane-bounded organelle 16.0% (16/100) 1.19 0.001602 0.010296
GO:0042594 response to starvation 2.0% (2/100) 5.11 0.001585 0.010314
GO:0051716 cellular response to stimulus 6.0% (6/100) 2.27 0.00164 0.010416
GO:0043227 membrane-bounded organelle 16.0% (16/100) 1.18 0.00173 0.010854
GO:0006974 DNA damage response 5.0% (5/100) 2.55 0.00176 0.01091
GO:0097435 supramolecular fiber organization 3.0% (3/100) 3.66 0.001827 0.011198
GO:0042162 telomeric DNA binding 2.0% (2/100) 4.94 0.002014 0.012199
GO:0043933 protein-containing complex organization 5.0% (5/100) 2.47 0.002203 0.013195
GO:0000226 microtubule cytoskeleton organization 3.0% (3/100) 3.53 0.002332 0.013657
GO:0035060 brahma complex 1.0% (1/100) 8.75 0.002327 0.01378
GO:0071897 DNA biosynthetic process 2.0% (2/100) 4.81 0.002403 0.013916
GO:0010923 negative regulation of phosphatase activity 1.0% (1/100) 8.65 0.002493 0.014282
GO:0004683 calmodulin-dependent protein kinase activity 2.0% (2/100) 4.74 0.00265 0.014396
GO:0006289 nucleotide-excision repair 2.0% (2/100) 4.74 0.002627 0.01442
GO:0010857 calcium-dependent protein kinase activity 2.0% (2/100) 4.75 0.002604 0.014446
GO:0009931 calcium-dependent protein serine/threonine kinase activity 2.0% (2/100) 4.75 0.002604 0.014446
GO:0045324 late endosome to vacuole transport 2.0% (2/100) 4.76 0.002559 0.014499
GO:0009991 response to extracellular stimulus 2.0% (2/100) 4.61 0.003152 0.016782
GO:0031667 response to nutrient levels 2.0% (2/100) 4.61 0.00314 0.016886
GO:0003684 damaged DNA binding 2.0% (2/100) 4.59 0.00324 0.016907
GO:0006302 double-strand break repair 3.0% (3/100) 3.37 0.003226 0.016999
GO:0006914 autophagy 2.0% (2/100) 4.56 0.003381 0.017297
GO:0061919 process utilizing autophagic mechanism 2.0% (2/100) 4.56 0.003381 0.017297
GO:0140513 nuclear protein-containing complex 6.0% (6/100) 2.01 0.003975 0.02014
GO:0031515 tRNA (m1A) methyltransferase complex 1.0% (1/100) 7.91 0.004152 0.020643
GO:0000822 inositol hexakisphosphate binding 1.0% (1/100) 7.91 0.004152 0.020643
GO:0000994 RNA polymerase III core binding 1.0% (1/100) 7.8 0.004483 0.022082
GO:0016480 negative regulation of transcription by RNA polymerase III 1.0% (1/100) 7.75 0.004649 0.022478
GO:0006359 regulation of transcription by RNA polymerase III 1.0% (1/100) 7.75 0.004649 0.022478
GO:0008017 microtubule binding 3.0% (3/100) 3.17 0.004695 0.022491
GO:0005742 mitochondrial outer membrane translocase complex 1.0% (1/100) 7.65 0.00498 0.022626
GO:0098799 outer mitochondrial membrane protein complex 1.0% (1/100) 7.65 0.00498 0.022626
GO:0035305 negative regulation of dephosphorylation 1.0% (1/100) 7.65 0.00498 0.022626
GO:0016514 SWI/SNF complex 1.0% (1/100) 7.65 0.00498 0.022626
GO:0007010 cytoskeleton organization 3.0% (3/100) 3.13 0.005032 0.022666
GO:0043170 macromolecule metabolic process 20.0% (20/100) 0.88 0.005241 0.022825
GO:0046777 protein autophosphorylation 2.0% (2/100) 4.25 0.005122 0.022873
GO:0045892 negative regulation of DNA-templated transcription 2.0% (2/100) 4.23 0.005232 0.022975
GO:1902679 negative regulation of RNA biosynthetic process 2.0% (2/100) 4.23 0.005232 0.022975
GO:0099080 supramolecular complex 3.0% (3/100) 3.15 0.004905 0.023286
GO:0006310 DNA recombination 3.0% (3/100) 3.14 0.004978 0.023424
GO:0015245 fatty acid transmembrane transporter activity 1.0% (1/100) 7.47 0.005643 0.024176
GO:0006259 DNA metabolic process 6.0% (6/100) 1.9 0.0057 0.024225
GO:0015631 tubulin binding 3.0% (3/100) 3.08 0.005619 0.024273
GO:0007049 cell cycle 2.0% (2/100) 4.1 0.006236 0.026291
GO:0042645 mitochondrial nucleoid 1.0% (1/100) 7.23 0.006635 0.027751
GO:0090304 nucleic acid metabolic process 10.0% (10/100) 1.32 0.006803 0.028229
GO:0051253 negative regulation of RNA metabolic process 2.0% (2/100) 4.02 0.006903 0.02842
GO:0035673 oligopeptide transmembrane transporter activity 2.0% (2/100) 4.01 0.007011 0.028421
GO:1904680 peptide transmembrane transporter activity 2.0% (2/100) 4.01 0.007011 0.028421
GO:0051096 positive regulation of helicase activity 1.0% (1/100) 7.13 0.007131 0.028687
GO:0000723 telomere maintenance 2.0% (2/100) 3.98 0.007358 0.028724
GO:0032200 telomere organization 2.0% (2/100) 3.98 0.007358 0.028724
GO:0051346 negative regulation of hydrolase activity 1.0% (1/100) 7.06 0.007461 0.028913
GO:0007017 microtubule-based process 3.0% (3/100) 2.94 0.007345 0.029105
GO:0008152 metabolic process 26.0% (26/100) 0.7 0.007314 0.029202
GO:1903047 mitotic cell cycle process 3.0% (3/100) 2.86 0.008405 0.032331
GO:0043527 tRNA methyltransferase complex 1.0% (1/100) 6.83 0.008782 0.033537
GO:0022607 cellular component assembly 4.0% (4/100) 2.31 0.008908 0.033772
GO:0005516 calmodulin binding 2.0% (2/100) 3.79 0.009435 0.035515
GO:0008422 beta-glucosidase activity 2.0% (2/100) 3.76 0.009768 0.03651
GO:0000785 chromatin 2.0% (2/100) 3.75 0.009874 0.036644
GO:0006264 mitochondrial DNA replication 1.0% (1/100) 6.6 0.010266 0.037055
GO:0032042 mitochondrial DNA metabolic process 1.0% (1/100) 6.6 0.010266 0.037055
GO:0032781 positive regulation of ATP-dependent activity 1.0% (1/100) 6.6 0.010266 0.037055
GO:0003838 sterol 24-C-methyltransferase activity 1.0% (1/100) 6.62 0.010101 0.037225
GO:2000028 regulation of photoperiodism, flowering 1.0% (1/100) 6.53 0.01076 0.038313
GO:0070973 protein localization to endoplasmic reticulum exit site 1.0% (1/100) 6.53 0.01076 0.038313
GO:0018105 peptidyl-serine phosphorylation 2.0% (2/100) 3.61 0.011901 0.041535
GO:0045934 negative regulation of nucleobase-containing compound metabolic process 2.0% (2/100) 3.61 0.011901 0.041535
GO:0018209 peptidyl-serine modification 2.0% (2/100) 3.61 0.011901 0.041535
GO:0042887 amide transmembrane transporter activity 2.0% (2/100) 3.57 0.012504 0.043354
GO:0034271 phosphatidylinositol 3-kinase complex, class III, type I 1.0% (1/100) 6.27 0.012898 0.043853
GO:0034272 phosphatidylinositol 3-kinase complex, class III, type II 1.0% (1/100) 6.27 0.012898 0.043853
GO:1990414 replication-born double-strand break repair via sister chromatid exchange 1.0% (1/100) 6.29 0.012734 0.04386
GO:0030247 polysaccharide binding 2.0% (2/100) 3.51 0.013555 0.0455
GO:0051095 regulation of helicase activity 1.0% (1/100) 6.2 0.013555 0.045791
GO:0015926 glucosidase activity 2.0% (2/100) 3.5 0.013799 0.046026
GO:0044238 primary metabolic process 23.0% (23/100) 0.68 0.014077 0.046656
GO:0043562 cellular response to nitrogen levels 1.0% (1/100) 6.06 0.014868 0.048365
GO:0006995 cellular response to nitrogen starvation 1.0% (1/100) 6.06 0.014868 0.048365
GO:0044614 nuclear pore cytoplasmic filaments 1.0% (1/100) 6.05 0.015031 0.048599
GO:0071704 organic substance metabolic process 24.0% (24/100) 0.65 0.014817 0.048805
GO:0006807 nitrogen compound metabolic process 20.0% (20/100) 0.73 0.015552 0.049974
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (100) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms