Coexpression cluster: Cluster_776 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0043227 membrane-bounded organelle 24.44% (22/90) 1.79 0.0 2.3e-05
GO:0030135 coated vesicle 4.44% (4/90) 6.37 0.0 2.6e-05
GO:0031410 cytoplasmic vesicle 6.67% (6/90) 4.33 1e-06 3.4e-05
GO:0097708 intracellular vesicle 6.67% (6/90) 4.33 1e-06 3.4e-05
GO:0043231 intracellular membrane-bounded organelle 24.44% (22/90) 1.8 0.0 3.4e-05
GO:0016192 vesicle-mediated transport 8.89% (8/90) 3.44 1e-06 4.1e-05
GO:0006996 organelle organization 11.11% (10/90) 2.98 1e-06 4.2e-05
GO:0061133 endopeptidase activator activity 2.22% (2/90) 10.38 1e-06 4.3e-05
GO:0110165 cellular anatomical entity 41.11% (37/90) 1.22 0.0 4.4e-05
GO:0043226 organelle 25.56% (23/90) 1.65 1e-06 4.7e-05
GO:0016485 protein processing 4.44% (4/90) 5.7 1e-06 5.1e-05
GO:0043229 intracellular organelle 25.56% (23/90) 1.65 1e-06 5.5e-05
GO:0031982 vesicle 6.67% (6/90) 4.07 2e-06 6.8e-05
GO:0005575 cellular_component 44.44% (40/90) 1.15 0.0 6.9e-05
GO:0008150 biological_process 51.11% (46/90) 0.88 3e-06 8.8e-05
GO:0051641 cellular localization 10.0% (9/90) 2.92 3e-06 0.000109
GO:0016043 cellular component organization 13.33% (12/90) 2.33 5e-06 0.000144
GO:0000149 SNARE binding 4.44% (4/90) 5.13 6e-06 0.000176
GO:0051604 protein maturation 4.44% (4/90) 5.0 9e-06 0.000236
GO:0004366 glycerol-3-phosphate O-acyltransferase activity 2.22% (2/90) 8.66 1.2e-05 0.000302
GO:0009987 cellular process 37.78% (34/90) 1.04 1.3e-05 0.000316
GO:0071840 cellular component organization or biogenesis 13.33% (12/90) 2.18 1.4e-05 0.00033
GO:0016504 peptidase activator activity 2.22% (2/90) 8.21 2.2e-05 0.000492
GO:0061775 cohesin loader activity 2.22% (2/90) 8.09 2.6e-05 0.00056
GO:1901564 organonitrogen compound metabolic process 22.22% (20/90) 1.42 4e-05 0.000826
GO:0008541 proteasome regulatory particle, lid subcomplex 2.22% (2/90) 7.33 7.5e-05 0.001492
GO:0004222 metalloendopeptidase activity 3.33% (3/90) 5.12 9.6e-05 0.00178
GO:0009739 response to gibberellin 2.22% (2/90) 7.17 9.4e-05 0.001804
GO:0009723 response to ethylene 2.22% (2/90) 7.11 0.000102 0.001828
GO:0070628 proteasome binding 2.22% (2/90) 6.95 0.000127 0.00219
GO:0005488 binding 40.0% (36/90) 0.83 0.000157 0.002621
GO:0033036 macromolecule localization 6.67% (6/90) 2.83 0.000214 0.003172
GO:0070727 cellular macromolecule localization 6.67% (6/90) 2.83 0.000212 0.003231
GO:0019538 protein metabolic process 17.78% (16/90) 1.45 0.00021 0.003301
GO:0008104 protein localization 6.67% (6/90) 2.84 0.000209 0.003391
GO:0005905 clathrin-coated pit 2.22% (2/90) 6.5 0.000238 0.003423
GO:0030134 COPII-coated ER to Golgi transport vesicle 2.22% (2/90) 6.41 0.000268 0.003554
GO:0005545 1-phosphatidylinositol binding 2.22% (2/90) 6.37 0.000285 0.003598
GO:0048268 clathrin coat assembly 2.22% (2/90) 6.37 0.000285 0.003598
GO:0030136 clathrin-coated vesicle 2.22% (2/90) 6.33 0.000299 0.003601
GO:0051179 localization 13.33% (12/90) 1.73 0.000267 0.003635
GO:0032050 clathrin heavy chain binding 2.22% (2/90) 6.34 0.000295 0.003643
GO:0016050 vesicle organization 3.33% (3/90) 4.62 0.000265 0.003704
GO:0006807 nitrogen compound metabolic process 25.56% (23/90) 1.08 0.000342 0.004026
GO:0003674 molecular_function 53.33% (48/90) 0.59 0.000364 0.00419
GO:0072657 protein localization to membrane 3.33% (3/90) 4.39 0.000421 0.004366
GO:0046463 acylglycerol biosynthetic process 2.22% (2/90) 6.08 0.00042 0.004442
GO:0046460 neutral lipid biosynthetic process 2.22% (2/90) 6.08 0.00042 0.004442
GO:0019432 triglyceride biosynthetic process 2.22% (2/90) 6.08 0.00042 0.004442
GO:0007064 mitotic sister chromatid cohesion 2.22% (2/90) 6.12 0.000399 0.004496
GO:0098590 plasma membrane region 2.22% (2/90) 6.03 0.000455 0.004618
GO:0008237 metallopeptidase activity 3.33% (3/90) 4.31 0.0005 0.004982
GO:0140096 catalytic activity, acting on a protein 15.56% (14/90) 1.46 0.000512 0.005001
GO:0016236 macroautophagy 2.22% (2/90) 5.89 0.000547 0.005059
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport 3.33% (3/90) 4.27 0.000538 0.005069
GO:0043169 cation binding 11.11% (10/90) 1.82 0.000535 0.005136
GO:0008233 peptidase activity 6.67% (6/90) 2.57 0.000566 0.005145
GO:0033993 response to lipid 2.22% (2/90) 5.79 0.000632 0.005643
GO:0072583 clathrin-dependent endocytosis 2.22% (2/90) 5.68 0.000728 0.006288
GO:0044238 primary metabolic process 27.78% (25/90) 0.95 0.00072 0.006322
GO:0006638 neutral lipid metabolic process 2.22% (2/90) 5.57 0.000849 0.006873
GO:0006639 acylglycerol metabolic process 2.22% (2/90) 5.57 0.000849 0.006873
GO:0022607 cellular component assembly 5.56% (5/90) 2.79 0.000839 0.007012
GO:0006641 triglyceride metabolic process 2.22% (2/90) 5.58 0.000837 0.00711
GO:0032991 protein-containing complex 13.33% (12/90) 1.53 0.000917 0.007308
GO:0006900 vesicle budding from membrane 2.22% (2/90) 5.49 0.000954 0.007485
GO:0051668 localization within membrane 3.33% (3/90) 3.96 0.001011 0.007816
GO:0061135 endopeptidase regulator activity 2.22% (2/90) 5.36 0.001132 0.00862
GO:0005789 endoplasmic reticulum membrane 3.33% (3/90) 3.87 0.001206 0.009051
GO:0006898 receptor-mediated endocytosis 2.22% (2/90) 5.29 0.001251 0.009259
GO:0045017 glycerolipid biosynthetic process 3.33% (3/90) 3.81 0.001343 0.009663
GO:0030276 clathrin binding 2.22% (2/90) 5.24 0.001332 0.009716
GO:0061134 peptidase regulator activity 2.22% (2/90) 5.21 0.001384 0.009822
GO:0052648 ribitol phosphate metabolic process 1.11% (1/90) 9.25 0.001646 0.010274
GO:0009398 FMN biosynthetic process 1.11% (1/90) 9.25 0.001646 0.010274
GO:0046444 FMN metabolic process 1.11% (1/90) 9.25 0.001646 0.010274
GO:0052647 pentitol phosphate metabolic process 1.11% (1/90) 9.25 0.001646 0.010274
GO:0065003 protein-containing complex assembly 4.44% (4/90) 3.04 0.001508 0.010278
GO:0019774 proteasome core complex, beta-subunit complex 1.11% (1/90) 9.38 0.001497 0.010337
GO:0003879 ATP phosphoribosyltransferase activity 1.11% (1/90) 9.38 0.001497 0.010337
GO:0008047 enzyme activator activity 3.33% (3/90) 3.74 0.001548 0.010414
GO:0046907 intracellular transport 5.56% (5/90) 2.58 0.001583 0.010514
GO:0007062 sister chromatid cohesion 2.22% (2/90) 5.1 0.001612 0.01057
GO:0140677 molecular function activator activity 3.33% (3/90) 3.65 0.001843 0.010606
GO:0046872 metal ion binding 10.0% (9/90) 1.71 0.001763 0.010617
GO:0003729 mRNA binding 4.44% (4/90) 2.98 0.001744 0.010628
GO:0071704 organic substance metabolic process 27.78% (25/90) 0.86 0.001729 0.010664
GO:0051649 establishment of localization in cell 5.56% (5/90) 2.53 0.001835 0.010679
GO:0043167 ion binding 21.11% (19/90) 1.04 0.001834 0.010798
GO:0006508 proteolysis 6.67% (6/90) 2.23 0.00182 0.010839
GO:0034274 Atg12-Atg5-Atg16 complex 1.11% (1/90) 8.8 0.002244 0.012775
GO:0061024 membrane organization 3.33% (3/90) 3.54 0.002277 0.01282
GO:0004175 endopeptidase activity 4.44% (4/90) 2.84 0.002462 0.013713
GO:0006625 protein targeting to peroxisome 1.11% (1/90) 8.54 0.002692 0.014837
GO:0006914 autophagy 2.22% (2/90) 4.71 0.002751 0.014842
GO:0061919 process utilizing autophagic mechanism 2.22% (2/90) 4.71 0.002751 0.014842
GO:0008531 riboflavin kinase activity 1.11% (1/90) 8.38 0.002991 0.015973
GO:0071561 nucleus-vacuole junction 1.11% (1/90) 8.31 0.00314 0.016432
GO:0048193 Golgi vesicle transport 3.33% (3/90) 3.38 0.003115 0.016465
GO:0044232 organelle membrane contact site 1.11% (1/90) 8.25 0.00329 0.016872
GO:0019776 Atg8-family ligase activity 1.11% (1/90) 8.25 0.00329 0.016872
GO:0008152 metabolic process 27.78% (25/90) 0.79 0.003366 0.017096
GO:0043170 macromolecule metabolic process 21.11% (19/90) 0.96 0.003455 0.017376
GO:0005546 phosphatidylinositol-4,5-bisphosphate binding 2.22% (2/90) 4.46 0.003846 0.018975
GO:0003723 RNA binding 7.78% (7/90) 1.82 0.003824 0.019048
GO:0046486 glycerolipid metabolic process 3.33% (3/90) 3.25 0.004014 0.019615
GO:0030163 protein catabolic process 3.33% (3/90) 3.23 0.004169 0.020184
GO:1902936 phosphatidylinositol bisphosphate binding 2.22% (2/90) 4.34 0.004498 0.021376
GO:0005739 mitochondrion 4.44% (4/90) 2.6 0.004483 0.021503
GO:0006501 C-terminal protein lipidation 1.11% (1/90) 7.62 0.00508 0.023494
GO:0010033 response to organic substance 3.33% (3/90) 3.13 0.005043 0.023535
GO:0036211 protein modification process 12.22% (11/90) 1.3 0.00503 0.023688
GO:1901981 phosphatidylinositol phosphate binding 2.22% (2/90) 4.23 0.00524 0.02402
GO:0006897 endocytosis 2.22% (2/90) 4.21 0.005412 0.02459
GO:0006497 protein lipidation 2.22% (2/90) 4.19 0.005542 0.024965
GO:0044249 cellular biosynthetic process 8.89% (8/90) 1.56 0.005882 0.026268
GO:0018410 C-terminal protein amino acid modification 1.11% (1/90) 7.38 0.005973 0.026447
GO:0005634 nucleus 10.0% (9/90) 1.44 0.006148 0.026538
GO:0009056 catabolic process 6.67% (6/90) 1.88 0.006046 0.026541
GO:0035493 SNARE complex assembly 1.11% (1/90) 7.35 0.006122 0.02665
GO:1990380 K48-linked deubiquitinase activity 1.11% (1/90) 7.25 0.006569 0.028121
GO:0004843 cysteine-type deubiquitinase activity 2.22% (2/90) 4.04 0.006735 0.028362
GO:0004450 isocitrate dehydrogenase (NADP+) activity 1.11% (1/90) 7.21 0.006718 0.028522
GO:0031907 microbody lumen 1.11% (1/90) 7.12 0.007164 0.02922
GO:0005782 peroxisomal matrix 1.11% (1/90) 7.12 0.007164 0.02922
GO:0030242 autophagy of peroxisome 1.11% (1/90) 7.15 0.007015 0.029305
GO:0006796 phosphate-containing compound metabolic process 11.11% (10/90) 1.31 0.007093 0.029395
GO:0006793 phosphorus metabolic process 11.11% (10/90) 1.3 0.007374 0.029842
GO:0034654 nucleobase-containing compound biosynthetic process 4.44% (4/90) 2.38 0.00766 0.030757
GO:0101005 deubiquitinase activity 2.22% (2/90) 3.92 0.007894 0.031456
GO:1901137 carbohydrate derivative biosynthetic process 3.33% (3/90) 2.87 0.00835 0.03204
GO:0051234 establishment of localization 10.0% (9/90) 1.37 0.008318 0.032156
GO:0006417 regulation of translation 2.22% (2/90) 3.89 0.008259 0.032166
GO:0034248 regulation of amide metabolic process 2.22% (2/90) 3.89 0.008259 0.032166
GO:0003824 catalytic activity 28.89% (26/90) 0.67 0.008198 0.032415
GO:0005783 endoplasmic reticulum 3.33% (3/90) 2.85 0.008633 0.032881
GO:0016579 protein deubiquitination 2.22% (2/90) 3.84 0.008846 0.033448
GO:0098657 import into cell 2.22% (2/90) 3.83 0.008955 0.033613
GO:0043933 protein-containing complex organization 4.44% (4/90) 2.3 0.009124 0.033759
GO:1901700 response to oxygen-containing compound 2.22% (2/90) 3.82 0.009064 0.033779
GO:0009057 macromolecule catabolic process 4.44% (4/90) 2.3 0.00921 0.033835
GO:0035091 phosphatidylinositol binding 2.22% (2/90) 3.8 0.009285 0.03387
GO:1901576 organic substance biosynthetic process 8.89% (8/90) 1.44 0.009517 0.034475
GO:0006102 isocitrate metabolic process 1.11% (1/90) 6.62 0.010134 0.03571
GO:0004448 isocitrate dehydrogenase [NAD(P)+] activity 1.11% (1/90) 6.62 0.010134 0.03571
GO:0004594 pantothenate kinase activity 1.11% (1/90) 6.62 0.010134 0.03571
GO:0042221 response to chemical 3.33% (3/90) 2.77 0.010028 0.036074
GO:0019783 ubiquitin-like protein peptidase activity 2.22% (2/90) 3.72 0.010365 0.036277
GO:1902652 secondary alcohol metabolic process 1.11% (1/90) 6.54 0.010727 0.037292
GO:1990112 RQC complex 1.11% (1/90) 6.52 0.010875 0.037555
GO:0006605 protein targeting 2.22% (2/90) 3.67 0.011034 0.037852
GO:0034045 phagophore assembly site membrane 1.11% (1/90) 6.42 0.011616 0.038569
GO:0034272 phosphatidylinositol 3-kinase complex, class III, type II 1.11% (1/90) 6.42 0.011616 0.038569
GO:0034271 phosphatidylinositol 3-kinase complex, class III, type I 1.11% (1/90) 6.42 0.011616 0.038569
GO:0097550 transcription preinitiation complex 1.11% (1/90) 6.46 0.011319 0.038575
GO:0004722 protein serine/threonine phosphatase activity 2.22% (2/90) 3.62 0.011804 0.038947
GO:0006470 protein dephosphorylation 2.22% (2/90) 3.63 0.011559 0.039133
GO:0070646 protein modification by small protein removal 2.22% (2/90) 3.6 0.012094 0.03965
GO:0009725 response to hormone 2.22% (2/90) 3.59 0.012282 0.040012
GO:0043412 macromolecule modification 12.22% (11/90) 1.12 0.012401 0.040149
GO:0000287 magnesium ion binding 2.22% (2/90) 3.57 0.012492 0.040191
GO:0009058 biosynthetic process 8.89% (8/90) 1.36 0.012707 0.04063
GO:0006995 cellular response to nitrogen starvation 1.11% (1/90) 6.21 0.013391 0.042295
GO:0043562 cellular response to nitrogen levels 1.11% (1/90) 6.21 0.013391 0.042295
GO:0099023 vesicle tethering complex 2.22% (2/90) 3.44 0.014838 0.046581
GO:0009260 ribonucleotide biosynthetic process 2.22% (2/90) 3.43 0.015066 0.047013
GO:0009719 response to endogenous stimulus 2.22% (2/90) 3.42 0.01525 0.047301
GO:0006547 histidine metabolic process 1.11% (1/90) 6.0 0.015458 0.047379
GO:0000105 histidine biosynthetic process 1.11% (1/90) 6.0 0.015458 0.047379
GO:0046390 ribose phosphate biosynthetic process 2.22% (2/90) 3.38 0.016088 0.047621
GO:0035032 phosphatidylinositol 3-kinase complex, class III 1.11% (1/90) 5.95 0.016047 0.047773
GO:0006771 riboflavin metabolic process 1.11% (1/90) 5.95 0.016047 0.047773
GO:0005942 phosphatidylinositol 3-kinase complex 1.11% (1/90) 5.95 0.016047 0.047773
GO:0009231 riboflavin biosynthetic process 1.11% (1/90) 5.95 0.016047 0.047773
GO:0016791 phosphatase activity 3.33% (3/90) 2.51 0.016242 0.047802
GO:0006753 nucleoside phosphate metabolic process 3.33% (3/90) 2.5 0.016436 0.048101
GO:0030234 enzyme regulator activity 3.33% (3/90) 2.49 0.016619 0.048364
GO:0009117 nucleotide metabolic process 3.33% (3/90) 2.51 0.016001 0.048755
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (90) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms