Coexpression cluster: Cluster_216 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0033043 regulation of organelle organization 7.41% (4/54) 6.26 0.0 6.6e-05
GO:1903321 negative regulation of protein modification by small protein conjugation or removal 3.7% (2/54) 8.89 6e-06 0.000244
GO:1901874 negative regulation of post-translational protein modification 3.7% (2/54) 8.89 6e-06 0.000244
GO:0031397 negative regulation of protein ubiquitination 3.7% (2/54) 8.89 6e-06 0.000244
GO:1904667 negative regulation of ubiquitin protein ligase activity 3.7% (2/54) 8.89 6e-06 0.000244
GO:0051444 negative regulation of ubiquitin-protein transferase activity 3.7% (2/54) 8.89 6e-06 0.000244
GO:0051128 regulation of cellular component organization 7.41% (4/54) 5.52 2e-06 0.00027
GO:0031396 regulation of protein ubiquitination 3.7% (2/54) 7.15 8.7e-05 0.002318
GO:0051438 regulation of ubiquitin-protein transferase activity 3.7% (2/54) 7.15 8.7e-05 0.002318
GO:1903320 regulation of protein modification by small protein conjugation or removal 3.7% (2/54) 7.15 8.7e-05 0.002318
GO:1904666 regulation of ubiquitin protein ligase activity 3.7% (2/54) 7.15 8.7e-05 0.002318
GO:1901873 regulation of post-translational protein modification 3.7% (2/54) 7.01 0.000106 0.002594
GO:0051783 regulation of nuclear division 3.7% (2/54) 6.89 0.000127 0.002871
GO:0051348 negative regulation of transferase activity 3.7% (2/54) 6.77 0.00015 0.003148
GO:0031400 negative regulation of protein modification process 3.7% (2/54) 6.56 0.000202 0.003948
GO:0043086 negative regulation of catalytic activity 3.7% (2/54) 6.47 0.000231 0.004226
GO:0044092 negative regulation of molecular function 3.7% (2/54) 6.3 0.000294 0.005062
GO:0008017 microtubule binding 5.56% (3/54) 4.44 0.000366 0.005951
GO:0015631 tubulin binding 5.56% (3/54) 4.26 0.000526 0.008116
GO:0045488 pectin metabolic process 1.85% (1/54) 9.47 0.001409 0.017198
GO:0010393 galacturonan metabolic process 1.85% (1/54) 9.47 0.001409 0.017198
GO:2000694 regulation of phragmoplast microtubule organization 1.85% (1/54) 9.47 0.001409 0.017198
GO:0051248 negative regulation of protein metabolic process 3.7% (2/54) 5.22 0.001325 0.019417
GO:0051338 regulation of transferase activity 3.7% (2/54) 5.19 0.001396 0.019474
GO:0031399 regulation of protein modification process 3.7% (2/54) 4.92 0.002022 0.023693
GO:0070192 chromosome organization involved in meiotic cell cycle 1.85% (1/54) 8.47 0.002815 0.02661
GO:0034086 maintenance of sister chromatid cohesion 1.85% (1/54) 8.47 0.002815 0.02661
GO:0034090 maintenance of meiotic sister chromatid cohesion 1.85% (1/54) 8.47 0.002815 0.02661
GO:0045144 meiotic sister chromatid segregation 1.85% (1/54) 8.47 0.002815 0.02661
GO:0005634 nucleus 7.41% (4/54) 2.84 0.002382 0.026845
GO:0008092 cytoskeletal protein binding 5.56% (3/54) 3.45 0.002657 0.028829
GO:0004576 oligosaccharyl transferase activity 1.85% (1/54) 7.89 0.00422 0.031705
GO:0045132 meiotic chromosome segregation 1.85% (1/54) 7.89 0.00422 0.031705
GO:0098813 nuclear chromosome segregation 1.85% (1/54) 7.89 0.00422 0.031705
GO:0000819 sister chromatid segregation 1.85% (1/54) 7.89 0.00422 0.031705
GO:0051276 chromosome organization 3.7% (2/54) 4.52 0.003489 0.031946
GO:0050790 regulation of catalytic activity 3.7% (2/54) 4.49 0.0036 0.031964
GO:0065009 regulation of molecular function 3.7% (2/54) 4.38 0.00418 0.034995
GO:0006996 organelle organization 5.56% (3/54) 3.23 0.004069 0.035067
GO:0046488 phosphatidylinositol metabolic process 3.7% (2/54) 4.15 0.005737 0.039089
GO:0006260 DNA replication 3.7% (2/54) 4.13 0.005877 0.039133
GO:0007076 mitotic chromosome condensation 1.85% (1/54) 7.47 0.005623 0.039227
GO:0031145 anaphase-promoting complex-dependent catabolic process 1.85% (1/54) 7.47 0.005623 0.039227
GO:0000775 chromosome, centromeric region 1.85% (1/54) 7.47 0.005623 0.039227
GO:0022402 cell cycle process 3.7% (2/54) 4.0 0.007052 0.040514
GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process 1.85% (1/54) 6.89 0.008423 0.041132
GO:0015098 molybdate ion transmembrane transporter activity 1.85% (1/54) 6.89 0.008423 0.041132
GO:0004664 prephenate dehydratase activity 1.85% (1/54) 6.89 0.008423 0.041132
GO:0015689 molybdate ion transport 1.85% (1/54) 6.89 0.008423 0.041132
GO:0000808 origin recognition complex 1.85% (1/54) 6.89 0.008423 0.041132
GO:0000731 DNA synthesis involved in DNA repair 1.85% (1/54) 6.89 0.008423 0.041132
GO:0009094 L-phenylalanine biosynthetic process 1.85% (1/54) 6.89 0.008423 0.041132
GO:0030173 obsolete integral component of Golgi membrane 1.85% (1/54) 7.15 0.007024 0.04116
GO:0030261 chromosome condensation 1.85% (1/54) 7.15 0.007024 0.04116
GO:0098687 chromosomal region 1.85% (1/54) 7.15 0.007024 0.04116
GO:0051172 negative regulation of nitrogen compound metabolic process 3.7% (2/54) 3.96 0.007361 0.041477
GO:0043227 membrane-bounded organelle 7.41% (4/54) 2.41 0.006752 0.042092
GO:0043231 intracellular membrane-bounded organelle 7.41% (4/54) 2.41 0.006752 0.042092
GO:0051246 regulation of protein metabolic process 3.7% (2/54) 4.03 0.006749 0.043943
GO:0006259 DNA metabolic process 5.56% (3/54) 2.87 0.008072 0.044624
GO:0016308 1-phosphatidylinositol-4-phosphate 5-kinase activity 1.85% (1/54) 6.66 0.00982 0.047168
GO:0006650 glycerophospholipid metabolic process 3.7% (2/54) 3.7 0.010411 0.047664
GO:0006486 protein glycosylation 3.7% (2/54) 3.7 0.010411 0.047664
GO:0043413 macromolecule glycosylation 3.7% (2/54) 3.7 0.010411 0.047664
GO:0071897 DNA biosynthetic process 1.85% (1/54) 6.47 0.011215 0.048323
GO:0007059 chromosome segregation 1.85% (1/54) 6.47 0.011215 0.048323
GO:0008150 biological_process 46.3% (25/54) 0.6 0.010744 0.048429
GO:0070085 glycosylation 3.7% (2/54) 3.65 0.011153 0.049512
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (54) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms