Coexpression cluster: Cluster_430 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006285 base-excision repair, AP site formation 50.0% (1/2) 14.23 5.2e-05 0.003339
GO:0003691 double-stranded telomeric DNA binding 50.0% (1/2) 12.23 0.000209 0.004452
GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity 50.0% (1/2) 12.64 0.000157 0.005008
GO:0042162 telomeric DNA binding 50.0% (1/2) 11.06 0.00047 0.007512
GO:0051539 4 iron, 4 sulfur cluster binding 50.0% (1/2) 9.83 0.001095 0.008763
GO:0003677 DNA binding 100.0% (2/2) 4.7 0.001482 0.009482
GO:0019104 DNA N-glycosylase activity 50.0% (1/2) 9.9 0.001043 0.009538
GO:0006284 base-excision repair 50.0% (1/2) 9.53 0.001356 0.009643
GO:0006334 nucleosome assembly 50.0% (1/2) 9.98 0.000991 0.010571
GO:0034728 nucleosome organization 50.0% (1/2) 9.98 0.000991 0.010571
GO:0065004 protein-DNA complex assembly 50.0% (1/2) 9.1 0.001825 0.01062
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 50.0% (1/2) 8.77 0.002294 0.012236
GO:0032993 protein-DNA complex 50.0% (1/2) 8.2 0.003388 0.01549
GO:0006338 chromatin remodeling 50.0% (1/2) 8.1 0.003649 0.015568
GO:0071824 protein-DNA complex organization 50.0% (1/2) 7.67 0.004898 0.015675
GO:0051536 iron-sulfur cluster binding 50.0% (1/2) 7.82 0.00443 0.015751
GO:0051540 metal cluster binding 50.0% (1/2) 7.82 0.00443 0.015751
GO:0003676 nucleic acid binding 100.0% (2/2) 3.85 0.004784 0.016116
GO:0000786 nucleosome 50.0% (1/2) 8.25 0.003284 0.016169
GO:0006325 chromatin organization 50.0% (1/2) 7.94 0.004065 0.016262
GO:0140097 catalytic activity, acting on DNA 50.0% (1/2) 6.95 0.008071 0.022457
GO:0065003 protein-containing complex assembly 50.0% (1/2) 6.99 0.007863 0.022873
GO:0005575 cellular_component 100.0% (2/2) 3.43 0.008584 0.02289
GO:0003690 double-stranded DNA binding 50.0% (1/2) 7.04 0.007603 0.023171
GO:0006281 DNA repair 50.0% (1/2) 6.7 0.009577 0.024517
GO:0006974 DNA damage response 50.0% (1/2) 6.64 0.009992 0.024596
GO:0022607 cellular component assembly 50.0% (1/2) 6.55 0.010615 0.025162
GO:0043933 protein-containing complex organization 50.0% (1/2) 6.33 0.012379 0.026408
GO:0033554 cellular response to stress 50.0% (1/2) 6.42 0.011653 0.026635
GO:0051716 cellular response to stimulus 50.0% (1/2) 6.36 0.01212 0.026746
GO:0006259 DNA metabolic process 50.0% (1/2) 6.04 0.015125 0.031226
GO:0043565 sequence-specific DNA binding 50.0% (1/2) 5.85 0.017298 0.034597
GO:0005634 nucleus 50.0% (1/2) 5.59 0.020606 0.039963
GO:0016798 hydrolase activity, acting on glycosyl bonds 50.0% (1/2) 5.36 0.024165 0.045487
GO:0140640 catalytic activity, acting on a nucleic acid 50.0% (1/2) 5.11 0.028798 0.048502
GO:0097159 organic cyclic compound binding 100.0% (2/2) 2.58 0.028158 0.048706
GO:0043231 intracellular membrane-bounded organelle 50.0% (1/2) 5.17 0.027615 0.049094
GO:0043227 membrane-bounded organelle 50.0% (1/2) 5.17 0.027615 0.049094
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms