Coexpression cluster: Cluster_79 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003735 structural constituent of ribosome 31.52% (29/92) 5.13 0.0 0.0
GO:0006518 peptide metabolic process 31.52% (29/92) 5.04 0.0 0.0
GO:0006412 translation 30.43% (28/92) 5.1 0.0 0.0
GO:0043043 peptide biosynthetic process 30.43% (28/92) 5.07 0.0 0.0
GO:0005198 structural molecule activity 31.52% (29/92) 4.93 0.0 0.0
GO:0043603 amide metabolic process 31.52% (29/92) 4.87 0.0 0.0
GO:0043604 amide biosynthetic process 30.43% (28/92) 4.97 0.0 0.0
GO:0005840 ribosome 28.26% (26/92) 5.1 0.0 0.0
GO:0009059 macromolecule biosynthetic process 32.61% (30/92) 4.25 0.0 0.0
GO:0043228 non-membrane-bounded organelle 28.26% (26/92) 4.7 0.0 0.0
GO:0043232 intracellular non-membrane-bounded organelle 28.26% (26/92) 4.7 0.0 0.0
GO:1901566 organonitrogen compound biosynthetic process 32.61% (30/92) 4.16 0.0 0.0
GO:0044271 cellular nitrogen compound biosynthetic process 33.7% (31/92) 4.01 0.0 0.0
GO:0044249 cellular biosynthetic process 36.96% (34/92) 3.45 0.0 0.0
GO:0034641 cellular nitrogen compound metabolic process 41.3% (38/92) 3.13 0.0 0.0
GO:1901576 organic substance biosynthetic process 36.96% (34/92) 3.35 0.0 0.0
GO:0009058 biosynthetic process 36.96% (34/92) 3.23 0.0 0.0
GO:0043229 intracellular organelle 31.52% (29/92) 3.67 0.0 0.0
GO:0043226 organelle 31.52% (29/92) 3.67 0.0 0.0
GO:0005575 cellular_component 42.39% (39/92) 2.19 0.0 0.0
GO:0110165 cellular anatomical entity 35.87% (33/92) 2.4 0.0 0.0
GO:0044237 cellular metabolic process 44.57% (41/92) 1.9 0.0 0.0
GO:0009987 cellular process 53.26% (49/92) 1.53 0.0 0.0
GO:0006807 nitrogen compound metabolic process 43.48% (40/92) 1.79 0.0 0.0
GO:0043170 macromolecule metabolic process 40.22% (37/92) 1.85 0.0 0.0
GO:0044238 primary metabolic process 45.65% (42/92) 1.58 0.0 0.0
GO:0044391 ribosomal subunit 8.7% (8/92) 5.45 0.0 0.0
GO:0071704 organic substance metabolic process 45.65% (42/92) 1.46 0.0 0.0
GO:0019538 protein metabolic process 31.52% (29/92) 1.98 0.0 0.0
GO:1901564 organonitrogen compound metabolic process 34.78% (32/92) 1.82 0.0 0.0
GO:0008152 metabolic process 45.65% (42/92) 1.38 0.0 0.0
GO:0015934 large ribosomal subunit 6.52% (6/92) 5.7 0.0 0.0
GO:1990904 ribonucleoprotein complex 8.7% (8/92) 4.24 0.0 0.0
GO:0008150 biological_process 55.43% (51/92) 0.86 1e-06 5e-06
GO:0003723 RNA binding 11.96% (11/92) 2.62 2e-06 1.5e-05
GO:0005762 mitochondrial large ribosomal subunit 2.17% (2/92) 7.7 3.4e-05 0.000275
GO:0000315 organellar large ribosomal subunit 2.17% (2/92) 7.7 3.4e-05 0.000275
GO:0019843 rRNA binding 3.26% (3/92) 5.33 5.7e-05 0.000451
GO:0042255 ribosome assembly 2.17% (2/92) 7.12 8.5e-05 0.000651
GO:0032991 protein-containing complex 11.96% (11/92) 1.99 9.9e-05 0.000744
GO:0022607 cellular component assembly 5.43% (5/92) 3.35 0.000137 0.001001
GO:0016554 cytidine to uridine editing 2.17% (2/92) 6.24 0.000309 0.0022
GO:0098798 mitochondrial protein-containing complex 3.26% (3/92) 4.43 0.000375 0.002492
GO:0060590 ATPase regulator activity 2.17% (2/92) 6.12 0.00037 0.002516
GO:0016553 base conversion or substitution editing 2.17% (2/92) 6.12 0.00037 0.002516
GO:0003676 nucleic acid binding 17.39% (16/92) 1.33 0.000541 0.003519
GO:0016070 RNA metabolic process 8.7% (8/92) 2.08 0.000617 0.003926
GO:0140694 non-membrane-bounded organelle assembly 2.17% (2/92) 5.7 0.000669 0.004081
GO:0009451 RNA modification 4.35% (4/92) 3.35 0.000658 0.004099
GO:0006139 nucleobase-containing compound metabolic process 10.87% (10/92) 1.63 0.001471 0.008796
GO:0070925 organelle assembly 2.17% (2/92) 5.06 0.001649 0.009667
GO:0032048 cardiolipin metabolic process 1.09% (1/92) 8.7 0.0024 0.010873
GO:0016435 rRNA (guanine) methyltransferase activity 1.09% (1/92) 8.7 0.0024 0.010873
GO:0070476 rRNA (guanine-N7)-methylation 1.09% (1/92) 8.7 0.0024 0.010873
GO:0009088 threonine biosynthetic process 1.09% (1/92) 8.7 0.0024 0.010873
GO:0006655 phosphatidylglycerol biosynthetic process 1.09% (1/92) 8.7 0.0024 0.010873
GO:0004073 aspartate-semialdehyde dehydrogenase activity 1.09% (1/92) 8.7 0.0024 0.010873
GO:0046471 phosphatidylglycerol metabolic process 1.09% (1/92) 8.7 0.0024 0.010873
GO:0032049 cardiolipin biosynthetic process 1.09% (1/92) 8.7 0.0024 0.010873
GO:0043461 proton-transporting ATP synthase complex assembly 1.09% (1/92) 8.7 0.0024 0.010873
GO:0006884 cell volume homeostasis 1.09% (1/92) 8.7 0.0024 0.010873
GO:0034715 pICln-Sm protein complex 1.09% (1/92) 8.7 0.0024 0.010873
GO:0008361 regulation of cell size 1.09% (1/92) 8.7 0.0024 0.010873
GO:0034709 methylosome 1.09% (1/92) 8.7 0.0024 0.010873
GO:0000408 EKC/KEOPS complex 1.09% (1/92) 8.7 0.0024 0.010873
GO:0015935 small ribosomal subunit 2.17% (2/92) 4.9 0.002068 0.01189
GO:0046483 heterocycle metabolic process 10.87% (10/92) 1.49 0.002917 0.013017
GO:0006725 cellular aromatic compound metabolic process 10.87% (10/92) 1.45 0.003675 0.016158
GO:1901360 organic cyclic compound metabolic process 10.87% (10/92) 1.42 0.00423 0.018068
GO:0036265 RNA (guanine-N7)-methylation 1.09% (1/92) 7.7 0.004794 0.018145
GO:0002949 tRNA threonylcarbamoyladenosine modification 1.09% (1/92) 7.7 0.004794 0.018145
GO:0006566 threonine metabolic process 1.09% (1/92) 7.7 0.004794 0.018145
GO:0006549 isoleucine metabolic process 1.09% (1/92) 7.7 0.004794 0.018145
GO:0009097 isoleucine biosynthetic process 1.09% (1/92) 7.7 0.004794 0.018145
GO:0045041 protein import into mitochondrial intermembrane space 1.09% (1/92) 7.7 0.004794 0.018145
GO:0004044 amidophosphoribosyltransferase activity 1.09% (1/92) 7.7 0.004794 0.018145
GO:0042030 ATPase inhibitor activity 1.09% (1/92) 7.7 0.004794 0.018145
GO:0070525 tRNA threonylcarbamoyladenosine metabolic process 1.09% (1/92) 7.7 0.004794 0.018145
GO:0090304 nucleic acid metabolic process 8.7% (8/92) 1.64 0.00419 0.018156
GO:0065003 protein-containing complex assembly 3.26% (3/92) 3.05 0.005824 0.021768
GO:0017062 respiratory chain complex III assembly 1.09% (1/92) 7.12 0.007183 0.024686
GO:0004831 tyrosine-tRNA ligase activity 1.09% (1/92) 7.12 0.007183 0.024686
GO:0034551 mitochondrial respiratory chain complex III assembly 1.09% (1/92) 7.12 0.007183 0.024686
GO:0032780 negative regulation of ATP-dependent activity 1.09% (1/92) 7.12 0.007183 0.024686
GO:0004605 phosphatidate cytidylyltransferase activity 1.09% (1/92) 7.12 0.007183 0.024686
GO:0043462 regulation of ATP-dependent activity 1.09% (1/92) 7.12 0.007183 0.024686
GO:0071840 cellular component organization or biogenesis 6.52% (6/92) 1.84 0.006692 0.024701
GO:0003674 molecular_function 58.7% (54/92) 0.36 0.008165 0.027742
GO:0000774 adenyl-nucleotide exchange factor activity 1.09% (1/92) 6.7 0.009566 0.032136
GO:0009113 purine nucleobase biosynthetic process 1.09% (1/92) 6.12 0.014315 0.047033
GO:0070071 proton-transporting two-sector ATPase complex assembly 1.09% (1/92) 6.12 0.014315 0.047033
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (92) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms