Coexpression cluster: Cluster_68 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009057 macromolecule catabolic process 6.58% (5/76) 3.36 0.000133 0.017047
GO:0003674 molecular_function 68.42% (52/76) 0.58 5.2e-05 0.019785
GO:0030163 protein catabolic process 3.95% (3/76) 5.04 0.000107 0.020526
GO:0006352 DNA-templated transcription initiation 3.95% (3/76) 4.48 0.000342 0.026271
GO:0036402 proteasome-activating activity 2.63% (2/76) 6.28 0.000298 0.028637
GO:0016787 hydrolase activity 18.42% (14/76) 1.42 0.000621 0.034045
GO:0032266 phosphatidylinositol-3-phosphate binding 1.32% (1/76) 8.98 0.001983 0.034605
GO:1901981 phosphatidylinositol phosphate binding 1.32% (1/76) 8.98 0.001983 0.034605
GO:0004661 protein geranylgeranyltransferase activity 1.32% (1/76) 8.98 0.001983 0.034605
GO:0004663 Rab geranylgeranyltransferase activity 1.32% (1/76) 8.98 0.001983 0.034605
GO:0070727 cellular macromolecule localization 5.26% (4/76) 3.01 0.001568 0.035424
GO:0033036 macromolecule localization 5.26% (4/76) 3.01 0.001568 0.035424
GO:0008104 protein localization 5.26% (4/76) 3.01 0.001568 0.035424
GO:0016485 protein processing 2.63% (2/76) 4.85 0.002212 0.036934
GO:0051641 cellular localization 6.58% (5/76) 2.89 0.000596 0.038142
GO:1901565 organonitrogen compound catabolic process 3.95% (3/76) 3.21 0.0043 0.038399
GO:0016817 hydrolase activity, acting on acid anhydrides 6.58% (5/76) 2.25 0.004158 0.038945
GO:0046474 glycerophospholipid biosynthetic process 2.63% (2/76) 4.33 0.004468 0.038992
GO:0071705 nitrogen compound transport 5.26% (4/76) 2.61 0.004299 0.039301
GO:0006661 phosphatidylinositol biosynthetic process 2.63% (2/76) 4.98 0.001851 0.039492
GO:0051604 protein maturation 2.63% (2/76) 4.39 0.004125 0.039596
GO:0008670 2,4-dienoyl-CoA reductase (NADPH) activity 1.32% (1/76) 7.98 0.003961 0.04003
GO:0018344 protein geranylgeranylation 1.32% (1/76) 7.98 0.003961 0.04003
GO:0043023 ribosomal large subunit binding 1.32% (1/76) 7.98 0.003961 0.04003
GO:0002953 5'-deoxynucleotidase activity 1.32% (1/76) 7.98 0.003961 0.04003
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.58% (5/76) 2.25 0.004093 0.040298
GO:0051649 establishment of localization in cell 5.26% (4/76) 3.03 0.001501 0.041159
GO:0023051 regulation of signaling 2.63% (2/76) 4.62 0.003025 0.041491
GO:0009966 regulation of signal transduction 2.63% (2/76) 4.62 0.003025 0.041491
GO:0010646 regulation of cell communication 2.63% (2/76) 4.62 0.003025 0.041491
GO:0046907 intracellular transport 5.26% (4/76) 3.05 0.001435 0.042386
GO:0045184 establishment of protein localization 5.26% (4/76) 3.05 0.001435 0.042386
GO:1901575 organic substance catabolic process 7.89% (6/76) 2.4 0.000998 0.042589
GO:0043170 macromolecule metabolic process 22.37% (17/76) 1.0 0.003757 0.043719
GO:0016887 ATP hydrolysis activity 5.26% (4/76) 2.77 0.002854 0.043843
GO:0005488 binding 44.74% (34/76) 0.62 0.002766 0.044259
GO:0016462 pyrophosphatase activity 6.58% (5/76) 2.28 0.003716 0.044588
GO:0070646 protein modification by small protein removal 2.63% (2/76) 4.42 0.003958 0.0447
GO:0016579 protein deubiquitination 2.63% (2/76) 4.49 0.003634 0.045014
GO:0051603 proteolysis involved in protein catabolic process 3.95% (3/76) 3.31 0.003541 0.045329
GO:0006886 intracellular protein transport 3.95% (3/76) 3.31 0.003541 0.045329
GO:0009056 catabolic process 7.89% (6/76) 2.34 0.001199 0.046051
GO:0015031 protein transport 5.26% (4/76) 3.2 0.000964 0.046262
GO:0009532 plastid stroma 1.32% (1/76) 7.39 0.005936 0.047489
GO:0008441 3'(2'),5'-bisphosphate nucleotidase activity 1.32% (1/76) 7.39 0.005936 0.047489
GO:0009570 chloroplast stroma 1.32% (1/76) 7.39 0.005936 0.047489
GO:0004843 cysteine-type deubiquitinase activity 2.63% (2/76) 4.17 0.005574 0.047563
GO:0016192 vesicle-mediated transport 5.26% (4/76) 3.06 0.001392 0.048605
GO:0045017 glycerolipid biosynthetic process 2.63% (2/76) 4.07 0.006374 0.049948
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (76) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms