Coexpression cluster: Cluster_53 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016192 vesicle-mediated transport 18.33% (11/60) 4.86 0.0 0.0
GO:0051179 localization 26.67% (16/60) 2.74 0.0 0.0
GO:0051234 establishment of localization 26.67% (16/60) 2.75 0.0 0.0
GO:0006810 transport 26.67% (16/60) 2.78 0.0 0.0
GO:0071702 organic substance transport 15.0% (9/60) 3.7 0.0 2e-06
GO:0017119 Golgi transport complex 5.0% (3/60) 8.58 0.0 2e-06
GO:0005575 cellular_component 35.0% (21/60) 1.92 0.0 2e-06
GO:0015031 protein transport 11.67% (7/60) 4.35 0.0 2e-06
GO:0051641 cellular localization 13.33% (8/60) 3.91 0.0 2e-06
GO:0008104 protein localization 11.67% (7/60) 4.16 0.0 3e-06
GO:0033036 macromolecule localization 11.67% (7/60) 4.16 0.0 3e-06
GO:0070727 cellular macromolecule localization 11.67% (7/60) 4.16 0.0 3e-06
GO:0006886 intracellular protein transport 10.0% (6/60) 4.65 0.0 3e-06
GO:0051649 establishment of localization in cell 11.67% (7/60) 4.18 0.0 4e-06
GO:0045184 establishment of protein localization 11.67% (7/60) 4.2 0.0 4e-06
GO:0046907 intracellular transport 11.67% (7/60) 4.2 0.0 4e-06
GO:0032991 protein-containing complex 20.0% (12/60) 2.74 0.0 4e-06
GO:0071705 nitrogen compound transport 11.67% (7/60) 3.76 1e-06 1.7e-05
GO:0030131 clathrin adaptor complex 5.0% (3/60) 7.1 1e-06 2.4e-05
GO:0098796 membrane protein complex 10.0% (6/60) 3.9 3e-06 5.2e-05
GO:0048193 Golgi vesicle transport 6.67% (4/60) 5.34 3e-06 5.3e-05
GO:0030119 AP-type membrane coat adaptor complex 5.0% (3/60) 6.66 3e-06 5.6e-05
GO:0099023 vesicle tethering complex 6.67% (4/60) 5.21 4e-06 6.7e-05
GO:0009987 cellular process 43.33% (26/60) 1.23 8e-06 0.000115
GO:0006891 intra-Golgi vesicle-mediated transport 3.33% (2/60) 8.32 1.4e-05 0.000204
GO:0030674 protein-macromolecule adaptor activity 5.0% (3/60) 5.78 2.3e-05 0.000313
GO:0060090 molecular adaptor activity 5.0% (3/60) 5.69 2.7e-05 0.000357
GO:0030117 membrane coat 5.0% (3/60) 5.44 4.6e-05 0.000581
GO:0005794 Golgi apparatus 3.33% (2/60) 6.86 0.000131 0.001598
GO:0003924 GTPase activity 6.67% (4/60) 3.73 0.000239 0.002811
GO:0031267 small GTPase binding 3.33% (2/60) 6.07 0.000405 0.004467
GO:0051020 GTPase binding 3.33% (2/60) 6.07 0.000405 0.004467
GO:0005525 GTP binding 6.67% (4/60) 3.47 0.000481 0.00485
GO:0032561 guanyl ribonucleotide binding 6.67% (4/60) 3.47 0.000481 0.00485
GO:0016020 membrane 13.33% (8/60) 2.13 0.000461 0.004927
GO:0008150 biological_process 51.67% (31/60) 0.76 0.000515 0.005046
GO:0019001 guanyl nucleotide binding 6.67% (4/60) 3.42 0.000546 0.005213
GO:0034655 nucleobase-containing compound catabolic process 5.0% (3/60) 4.12 0.000698 0.006488
GO:0046700 heterocycle catabolic process 5.0% (3/60) 3.99 0.000921 0.008124
GO:0044270 cellular nitrogen compound catabolic process 5.0% (3/60) 4.0 0.000899 0.008135
GO:0005484 SNAP receptor activity 3.33% (2/60) 5.41 0.001019 0.008563
GO:0030120 vesicle coat 3.33% (2/60) 5.41 0.001019 0.008563
GO:0030301 cholesterol transport 1.67% (1/60) 9.32 0.001565 0.011756
GO:0010182 sugar mediated signaling pathway 1.67% (1/60) 9.32 0.001565 0.011756
GO:0005802 trans-Golgi network 1.67% (1/60) 9.32 0.001565 0.011756
GO:0009756 carbohydrate mediated signaling 1.67% (1/60) 9.32 0.001565 0.011756
GO:0032367 intracellular cholesterol transport 1.67% (1/60) 9.32 0.001565 0.011756
GO:0019439 aromatic compound catabolic process 5.0% (3/60) 3.56 0.002125 0.015626
GO:1901361 organic cyclic compound catabolic process 5.0% (3/60) 3.55 0.0022 0.015849
GO:0009134 nucleoside diphosphate catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0009137 purine nucleoside diphosphate catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0006096 glycolytic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0046031 ADP metabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0009135 purine nucleoside diphosphate metabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0019364 pyridine nucleotide catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0009179 purine ribonucleoside diphosphate metabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0009154 purine ribonucleotide catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0009191 ribonucleoside diphosphate catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0009181 purine ribonucleoside diphosphate catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0072523 purine-containing compound catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0006195 purine nucleotide catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0046032 ADP catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0009185 ribonucleoside diphosphate metabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0072526 pyridine-containing compound catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0009261 ribonucleotide catabolic process 3.33% (2/60) 4.54 0.003392 0.017104
GO:0009166 nucleotide catabolic process 3.33% (2/60) 4.49 0.003638 0.018087
GO:0009132 nucleoside diphosphate metabolic process 3.33% (2/60) 4.46 0.003764 0.018454
GO:1901292 nucleoside phosphate catabolic process 3.33% (2/60) 4.39 0.004154 0.020089
GO:0006421 asparaginyl-tRNA aminoacylation 1.67% (1/60) 8.32 0.003128 0.020448
GO:0000220 vacuolar proton-transporting V-type ATPase, V0 domain 1.67% (1/60) 8.32 0.003128 0.020448
GO:0098791 Golgi apparatus subcompartment 1.67% (1/60) 8.32 0.003128 0.020448
GO:0004816 asparagine-tRNA ligase activity 1.67% (1/60) 8.32 0.003128 0.020448
GO:0031984 organelle subcompartment 1.67% (1/60) 8.32 0.003128 0.020448
GO:0030041 actin filament polymerization 1.67% (1/60) 7.73 0.004688 0.022066
GO:0004020 adenylylsulfate kinase activity 1.67% (1/60) 7.73 0.004688 0.022066
GO:0019899 enzyme binding 3.33% (2/60) 4.28 0.004845 0.022213
GO:0046434 organophosphate catabolic process 3.33% (2/60) 4.28 0.004845 0.022213
GO:0006090 pyruvate metabolic process 3.33% (2/60) 4.17 0.005585 0.025277
GO:0004634 phosphopyruvate hydratase activity 1.67% (1/60) 7.32 0.006246 0.025941
GO:0000015 phosphopyruvate hydratase complex 1.67% (1/60) 7.32 0.006246 0.025941
GO:0032366 intracellular sterol transport 1.67% (1/60) 7.32 0.006246 0.025941
GO:0030121 AP-1 adaptor complex 1.67% (1/60) 7.32 0.006246 0.025941
GO:0051258 protein polymerization 1.67% (1/60) 7.32 0.006246 0.025941
GO:0015850 organic hydroxy compound transport 1.67% (1/60) 7.32 0.006246 0.025941
GO:0015918 sterol transport 1.67% (1/60) 7.32 0.006246 0.025941
GO:0016758 hexosyltransferase activity 5.0% (3/60) 2.97 0.006749 0.027702
GO:0110165 cellular anatomical entity 16.67% (10/60) 1.29 0.006974 0.028297
GO:0140312 cargo adaptor activity 1.67% (1/60) 7.0 0.007802 0.028688
GO:0032365 intracellular lipid transport 1.67% (1/60) 7.0 0.007802 0.028688
GO:0035615 clathrin adaptor activity 1.67% (1/60) 7.0 0.007802 0.028688
GO:0000103 sulfate assimilation 1.67% (1/60) 7.0 0.007802 0.028688
GO:0070300 phosphatidic acid binding 1.67% (1/60) 7.0 0.007802 0.028688
GO:0017111 ribonucleoside triphosphate phosphatase activity 6.67% (4/60) 2.39 0.007213 0.028933
GO:0046496 nicotinamide nucleotide metabolic process 3.33% (2/60) 3.96 0.007382 0.028956
GO:0046034 ATP metabolic process 3.33% (2/60) 3.96 0.007382 0.028956
GO:1901136 carbohydrate derivative catabolic process 3.33% (2/60) 3.89 0.008092 0.02945
GO:0016052 carbohydrate catabolic process 3.33% (2/60) 3.88 0.008275 0.029805
GO:0019362 pyridine nucleotide metabolic process 3.33% (2/60) 3.93 0.007734 0.03
GO:0009144 purine nucleoside triphosphate metabolic process 3.33% (2/60) 3.84 0.008644 0.030212
GO:0009205 purine ribonucleoside triphosphate metabolic process 3.33% (2/60) 3.84 0.008644 0.030212
GO:0015078 proton transmembrane transporter activity 3.33% (2/60) 3.84 0.008644 0.030212
GO:0016462 pyrophosphatase activity 6.67% (4/60) 2.3 0.008852 0.030338
GO:0072524 pyridine-containing compound metabolic process 3.33% (2/60) 3.83 0.008832 0.030566
GO:0009199 ribonucleoside triphosphate metabolic process 3.33% (2/60) 3.78 0.009406 0.030743
GO:0015369 calcium:proton antiporter activity 1.67% (1/60) 6.73 0.009355 0.030863
GO:0015368 calcium:monoatomic cation antiporter activity 1.67% (1/60) 6.73 0.009355 0.030863
GO:0047334 diphosphate-fructose-6-phosphate 1-phosphotransferase activity 1.67% (1/60) 6.73 0.009355 0.030863
GO:0030008 TRAPP complex 1.67% (1/60) 6.73 0.009355 0.030863
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 6.67% (4/60) 2.27 0.009571 0.030996
GO:0016817 hydrolase activity, acting on acid anhydrides 6.67% (4/60) 2.26 0.009694 0.03111
GO:0022853 active monoatomic ion transmembrane transporter activity 3.33% (2/60) 3.75 0.009797 0.031157
GO:0009141 nucleoside triphosphate metabolic process 3.33% (2/60) 3.7 0.010398 0.032772
GO:0005885 Arp2/3 protein complex 1.67% (1/60) 6.32 0.012454 0.038906
GO:0006486 protein glycosylation 3.33% (2/60) 3.55 0.012736 0.039094
GO:0043413 macromolecule glycosylation 3.33% (2/60) 3.55 0.012736 0.039094
GO:0070085 glycosylation 3.33% (2/60) 3.5 0.013638 0.041502
GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity 1.67% (1/60) 6.15 0.014 0.04153
GO:0033179 proton-transporting V-type ATPase, V0 domain 1.67% (1/60) 6.15 0.014 0.04153
GO:0034314 Arp2/3 complex-mediated actin nucleation 1.67% (1/60) 6.15 0.014 0.04153
GO:0030127 COPII vesicle coat 1.67% (1/60) 6.0 0.015544 0.045725
GO:0006457 protein folding 3.33% (2/60) 3.37 0.016256 0.047425
GO:0032956 regulation of actin cytoskeleton organization 1.67% (1/60) 5.86 0.017085 0.047489
GO:0032970 regulation of actin filament-based process 1.67% (1/60) 5.86 0.017085 0.047489
GO:0008064 regulation of actin polymerization or depolymerization 1.67% (1/60) 5.86 0.017085 0.047489
GO:0110053 regulation of actin filament organization 1.67% (1/60) 5.86 0.017085 0.047489
GO:0030833 regulation of actin filament polymerization 1.67% (1/60) 5.86 0.017085 0.047489
GO:0030832 regulation of actin filament length 1.67% (1/60) 5.86 0.017085 0.047489
GO:0006002 fructose 6-phosphate metabolic process 1.67% (1/60) 5.73 0.018624 0.048698
GO:0032271 regulation of protein polymerization 1.67% (1/60) 5.73 0.018624 0.048698
GO:1902903 regulation of supramolecular fiber organization 1.67% (1/60) 5.73 0.018624 0.048698
GO:0043254 regulation of protein-containing complex assembly 1.67% (1/60) 5.73 0.018624 0.048698
GO:0032535 regulation of cellular component size 1.67% (1/60) 5.73 0.018624 0.048698
GO:0090066 regulation of anatomical structure size 1.67% (1/60) 5.73 0.018624 0.048698
GO:0003674 molecular_function 60.0% (36/60) 0.39 0.018004 0.049651
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (60) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms