Coexpression cluster: Cluster_110 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005524 ATP binding 19.23% (20/104) 1.63 5e-06 0.000336
GO:1901564 organonitrogen compound metabolic process 25.0% (26/104) 1.35 6e-06 0.000337
GO:0009056 catabolic process 9.62% (10/104) 2.63 5e-06 0.000386
GO:0140096 catalytic activity, acting on a protein 20.19% (21/104) 1.59 5e-06 0.000403
GO:0008152 metabolic process 35.58% (37/104) 1.02 9e-06 0.000418
GO:0006793 phosphorus metabolic process 17.31% (18/104) 1.78 4e-06 0.000467
GO:0032559 adenyl ribonucleotide binding 20.19% (21/104) 1.49 1.4e-05 0.000484
GO:0052742 phosphatidylinositol kinase activity 2.88% (3/104) 6.02 1.3e-05 0.0005
GO:0071704 organic substance metabolic process 33.65% (35/104) 1.02 1.6e-05 0.000518
GO:0044238 primary metabolic process 33.65% (35/104) 1.14 2e-06 0.000524
GO:0006650 glycerophospholipid metabolic process 4.81% (5/104) 4.08 1.2e-05 0.000534
GO:0019538 protein metabolic process 21.15% (22/104) 1.4 2.1e-05 0.000564
GO:0046486 glycerolipid metabolic process 4.81% (5/104) 3.95 1.9e-05 0.000584
GO:0043167 ion binding 28.85% (30/104) 1.1 2.9e-05 0.00059
GO:0008150 biological_process 50.0% (52/104) 0.71 2.6e-05 0.000591
GO:0061919 process utilizing autophagic mechanism 2.88% (3/104) 5.72 2.5e-05 0.000593
GO:0006914 autophagy 2.88% (3/104) 5.72 2.5e-05 0.000593
GO:0043632 modification-dependent macromolecule catabolic process 4.81% (5/104) 3.77 3.5e-05 0.0006
GO:0019941 modification-dependent protein catabolic process 4.81% (5/104) 3.77 3.5e-05 0.0006
GO:0006511 ubiquitin-dependent protein catabolic process 4.81% (5/104) 3.77 3.5e-05 0.0006
GO:0035639 purine ribonucleoside triphosphate binding 19.23% (20/104) 1.5 2.1e-05 0.000601
GO:0006796 phosphate-containing compound metabolic process 17.31% (18/104) 1.78 4e-06 0.000601
GO:0030554 adenyl nucleotide binding 20.19% (21/104) 1.42 2.9e-05 0.000611
GO:0016773 phosphotransferase activity, alcohol group as acceptor 14.42% (15/104) 1.77 3.1e-05 0.000612
GO:0032555 purine ribonucleotide binding 20.19% (21/104) 1.38 4.4e-05 0.000702
GO:0001727 lipid kinase activity 2.88% (3/104) 5.47 4.3e-05 0.000705
GO:0032553 ribonucleotide binding 20.19% (21/104) 1.36 5.3e-05 0.000735
GO:0016301 kinase activity 14.42% (15/104) 1.72 4.8e-05 0.000738
GO:0006629 lipid metabolic process 8.65% (9/104) 2.41 5.3e-05 0.000754
GO:0006644 phospholipid metabolic process 4.81% (5/104) 3.65 5.2e-05 0.000776
GO:0097367 carbohydrate derivative binding 20.19% (21/104) 1.35 6e-05 0.000802
GO:0051603 proteolysis involved in protein catabolic process 4.81% (5/104) 3.59 6.3e-05 0.000825
GO:0006508 proteolysis 8.65% (9/104) 2.36 7e-05 0.000853
GO:0046488 phosphatidylinositol metabolic process 3.85% (4/104) 4.2 6.9e-05 0.000871
GO:0003674 molecular_function 64.42% (67/104) 0.5 8.9e-05 0.001009
GO:0005488 binding 50.96% (53/104) 0.81 2e-06 0.001014
GO:0017076 purine nucleotide binding 20.19% (21/104) 1.31 8.9e-05 0.001033
GO:0019637 organophosphate metabolic process 6.73% (7/104) 2.75 8.8e-05 0.001054
GO:0046514 ceramide catabolic process 1.92% (2/104) 6.94 0.000109 0.001136
GO:0030149 sphingolipid catabolic process 1.92% (2/104) 6.94 0.000109 0.001136
GO:0046466 membrane lipid catabolic process 1.92% (2/104) 6.94 0.000109 0.001136
GO:0044255 cellular lipid metabolic process 6.73% (7/104) 2.68 0.000117 0.0012
GO:0006807 nitrogen compound metabolic process 25.96% (27/104) 1.05 0.000161 0.001607
GO:0016772 transferase activity, transferring phosphorus-containing groups 14.42% (15/104) 1.55 0.00017 0.001655
GO:1901265 nucleoside phosphate binding 20.19% (21/104) 1.23 0.000194 0.001808
GO:0000166 nucleotide binding 20.19% (21/104) 1.23 0.000194 0.001808
GO:0090407 organophosphate biosynthetic process 4.81% (5/104) 3.23 0.000207 0.001894
GO:0043168 anion binding 20.19% (21/104) 1.21 0.000227 0.002027
GO:1901363 heterocyclic compound binding 20.19% (21/104) 1.17 0.000337 0.002949
GO:0046474 glycerophospholipid biosynthetic process 2.88% (3/104) 4.47 0.000347 0.002973
GO:0036094 small molecule binding 20.19% (21/104) 1.16 0.000374 0.003146
GO:0006672 ceramide metabolic process 1.92% (2/104) 5.94 0.000473 0.003899
GO:0009057 macromolecule catabolic process 4.81% (5/104) 2.91 0.000573 0.00464
GO:0045017 glycerolipid biosynthetic process 2.88% (3/104) 4.2 0.000593 0.004713
GO:0097159 organic cyclic compound binding 29.81% (31/104) 0.83 0.000695 0.005419
GO:0016787 hydrolase activity 16.35% (17/104) 1.25 0.000729 0.005587
GO:0006665 sphingolipid metabolic process 1.92% (2/104) 5.62 0.000748 0.00563
GO:0009987 cellular process 31.73% (33/104) 0.78 0.000798 0.005901
GO:0016740 transferase activity 20.19% (21/104) 1.06 0.00091 0.00662
GO:1901575 organic substance catabolic process 6.73% (7/104) 2.17 0.000999 0.007027
GO:0043170 macromolecule metabolic process 22.12% (23/104) 0.99 0.000983 0.007027
GO:0004674 protein serine/threonine kinase activity 3.85% (4/104) 3.17 0.001065 0.007251
GO:0016307 obsolete phosphatidylinositol phosphate kinase activity 1.92% (2/104) 5.36 0.001084 0.007267
GO:0008654 phospholipid biosynthetic process 2.88% (3/104) 3.92 0.001051 0.007272
GO:0044242 cellular lipid catabolic process 1.92% (2/104) 5.28 0.00121 0.007983
GO:0036211 protein modification process 13.46% (14/104) 1.31 0.00153 0.009799
GO:0008237 metallopeptidase activity 2.88% (3/104) 3.74 0.001522 0.009896
GO:0003824 catalytic activity 36.54% (38/104) 0.64 0.001743 0.010997
GO:0006468 protein phosphorylation 10.58% (11/104) 1.48 0.001986 0.01235
GO:0016310 phosphorylation 10.58% (11/104) 1.46 0.002197 0.013466
GO:0061630 ubiquitin protein ligase activity 2.88% (3/104) 3.51 0.002377 0.013969
GO:0044237 cellular metabolic process 22.12% (23/104) 0.89 0.002328 0.014065
GO:0004672 protein kinase activity 10.58% (11/104) 1.45 0.002364 0.014085
GO:0061659 ubiquitin-like protein ligase activity 2.88% (3/104) 3.5 0.002447 0.014188
GO:0003952 NAD+ synthase (glutamine-hydrolyzing) activity 0.96% (1/104) 8.53 0.002713 0.014369
GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway 0.96% (1/104) 8.53 0.002713 0.014369
GO:0016236 macroautophagy 0.96% (1/104) 8.53 0.002713 0.014369
GO:0016303 1-phosphatidylinositol-3-kinase activity 0.96% (1/104) 8.53 0.002713 0.014369
GO:0060341 regulation of cellular localization 0.96% (1/104) 8.53 0.002713 0.014369
GO:2000641 regulation of early endosome to late endosome transport 0.96% (1/104) 8.53 0.002713 0.014369
GO:0032386 regulation of intracellular transport 0.96% (1/104) 8.53 0.002713 0.014369
GO:0016042 lipid catabolic process 1.92% (2/104) 4.67 0.002821 0.014761
GO:0043412 macromolecule modification 13.46% (14/104) 1.19 0.003176 0.016219
GO:0004842 ubiquitin-protein transferase activity 3.85% (4/104) 2.74 0.003152 0.016292
GO:0044248 cellular catabolic process 4.81% (5/104) 2.32 0.003437 0.016947
GO:0006661 phosphatidylinositol biosynthetic process 1.92% (2/104) 4.53 0.003429 0.017104
GO:0019787 ubiquitin-like protein transferase activity 3.85% (4/104) 2.71 0.003414 0.01723
GO:0016755 aminoacyltransferase activity 3.85% (4/104) 2.68 0.003634 0.017715
GO:0032991 protein-containing complex 8.65% (9/104) 1.53 0.004143 0.019972
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 1.92% (2/104) 4.32 0.004563 0.021752
GO:0070772 PAS complex 0.96% (1/104) 7.53 0.005419 0.023246
GO:0005942 phosphatidylinositol 3-kinase complex 0.96% (1/104) 7.53 0.005419 0.023246
GO:0017040 N-acylsphingosine amidohydrolase activity 0.96% (1/104) 7.53 0.005419 0.023246
GO:0035032 phosphatidylinositol 3-kinase complex, class III 0.96% (1/104) 7.53 0.005419 0.023246
GO:0004359 glutaminase activity 0.96% (1/104) 7.53 0.005419 0.023246
GO:0046473 phosphatidic acid metabolic process 0.96% (1/104) 7.53 0.005419 0.023246
GO:0030968 endoplasmic reticulum unfolded protein response 0.96% (1/104) 7.53 0.005419 0.023246
GO:0031519 PcG protein complex 0.96% (1/104) 7.53 0.005419 0.023246
GO:0048017 obsolete inositol lipid-mediated signaling 0.96% (1/104) 7.53 0.005419 0.023246
GO:0006654 phosphatidic acid biosynthetic process 0.96% (1/104) 7.53 0.005419 0.023246
GO:0006397 mRNA processing 2.88% (3/104) 3.06 0.00576 0.024467
GO:0061695 transferase complex, transferring phosphorus-containing groups 1.92% (2/104) 4.1 0.006122 0.0255
GO:0006643 membrane lipid metabolic process 1.92% (2/104) 4.1 0.006122 0.0255
GO:0008233 peptidase activity 5.77% (6/104) 1.85 0.006562 0.027069
GO:0016579 protein deubiquitination 1.92% (2/104) 4.03 0.006689 0.027328
GO:1990234 transferase complex 2.88% (3/104) 2.94 0.007168 0.029012
GO:0070646 protein modification by small protein removal 1.92% (2/104) 3.97 0.007278 0.029179
GO:0035101 FACT complex 0.96% (1/104) 6.94 0.008117 0.031092
GO:1990316 Atg1/ULK1 kinase complex 0.96% (1/104) 6.94 0.008117 0.031092
GO:0007032 endosome organization 0.96% (1/104) 6.94 0.008117 0.031092
GO:0010960 magnesium ion homeostasis 0.96% (1/104) 6.94 0.008117 0.031092
GO:0004594 pantothenate kinase activity 0.96% (1/104) 6.94 0.008117 0.031092
GO:0016298 lipase activity 1.92% (2/104) 3.83 0.008849 0.033595
GO:0006680 glucosylceramide catabolic process 0.96% (1/104) 6.53 0.010808 0.03651
GO:0006678 glucosylceramide metabolic process 0.96% (1/104) 6.53 0.010808 0.03651
GO:0015937 coenzyme A biosynthetic process 0.96% (1/104) 6.53 0.010808 0.03651
GO:0019377 glycolipid catabolic process 0.96% (1/104) 6.53 0.010808 0.03651
GO:0070536 protein K63-linked deubiquitination 0.96% (1/104) 6.53 0.010808 0.03651
GO:0004348 glucosylceramidase activity 0.96% (1/104) 6.53 0.010808 0.03651
GO:0006677 glycosylceramide metabolic process 0.96% (1/104) 6.53 0.010808 0.03651
GO:0046477 glycosylceramide catabolic process 0.96% (1/104) 6.53 0.010808 0.03651
GO:0003691 double-stranded telomeric DNA binding 0.96% (1/104) 6.53 0.010808 0.03651
GO:0046479 glycosphingolipid catabolic process 0.96% (1/104) 6.53 0.010808 0.03651
GO:0006687 glycosphingolipid metabolic process 0.96% (1/104) 6.53 0.010808 0.03651
GO:0006013 mannose metabolic process 0.96% (1/104) 6.53 0.010808 0.03651
GO:0016071 mRNA metabolic process 2.88% (3/104) 2.76 0.010044 0.037799
GO:1901565 organonitrogen compound catabolic process 2.88% (3/104) 2.75 0.010212 0.038095
GO:0089701 U2AF complex 0.96% (1/104) 6.2 0.013492 0.044185
GO:0006623 protein targeting to vacuole 0.96% (1/104) 6.2 0.013492 0.044185
GO:0061578 K63-linked deubiquitinase activity 0.96% (1/104) 6.2 0.013492 0.044185
GO:0048015 phosphatidylinositol-mediated signaling 0.96% (1/104) 6.2 0.013492 0.044185
GO:0101005 deubiquitinase activity 1.92% (2/104) 3.46 0.014372 0.046708
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.92% (2/104) 3.44 0.014781 0.047678
GO:0019783 ubiquitin-like protein peptidase activity 1.92% (2/104) 3.4 0.015615 0.049622
GO:0006338 chromatin remodeling 1.92% (2/104) 3.4 0.015615 0.049622
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (104) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms