Coexpression cluster: Cluster_278 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0045814 negative regulation of gene expression, epigenetic 33.33% (1/3) 8.89 0.002112 0.010859
GO:0031507 heterochromatin formation 33.33% (1/3) 8.89 0.002112 0.010859
GO:0070828 heterochromatin organization 33.33% (1/3) 8.89 0.002112 0.010859
GO:0031047 regulatory ncRNA-mediated gene silencing 33.33% (1/3) 8.69 0.002424 0.010909
GO:0040029 epigenetic regulation of gene expression 33.33% (1/3) 8.51 0.002737 0.010947
GO:0080188 gene silencing by RNA-directed DNA methylation 33.33% (1/3) 9.06 0.001877 0.016894
GO:0006346 DNA methylation-dependent heterochromatin formation 33.33% (1/3) 9.06 0.001877 0.016894
GO:0031048 regulatory ncRNA-mediated heterochromatin formation 33.33% (1/3) 9.06 0.001877 0.016894
GO:0140718 facultative heterochromatin formation 33.33% (1/3) 9.06 0.001877 0.016894
GO:0006338 chromatin remodeling 33.33% (1/3) 7.51 0.005468 0.019686
GO:0006325 chromatin organization 33.33% (1/3) 7.36 0.006092 0.019937
GO:0010629 negative regulation of gene expression 33.33% (1/3) 7.22 0.006715 0.020146
GO:0071824 protein-DNA complex organization 33.33% (1/3) 7.09 0.007339 0.020322
GO:0010605 negative regulation of macromolecule metabolic process 33.33% (1/3) 6.37 0.012004 0.022744
GO:0009892 negative regulation of metabolic process 33.33% (1/3) 6.37 0.012004 0.022744
GO:0009890 negative regulation of biosynthetic process 33.33% (1/3) 6.58 0.01045 0.023513
GO:0010558 negative regulation of macromolecule biosynthetic process 33.33% (1/3) 6.58 0.01045 0.023513
GO:0031327 negative regulation of cellular biosynthetic process 33.33% (1/3) 6.58 0.01045 0.023513
GO:0031324 negative regulation of cellular metabolic process 33.33% (1/3) 6.4 0.011771 0.024927
GO:0048523 negative regulation of cellular process 33.33% (1/3) 5.99 0.015648 0.028167
GO:0048519 negative regulation of biological process 33.33% (1/3) 5.9 0.016655 0.028551
GO:0043933 protein-containing complex organization 33.33% (1/3) 5.75 0.018511 0.030291
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms