Coexpression cluster: Cluster_33 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0072351 tricarboxylic acid biosynthetic process 2.2% (2/91) 8.13 1.7e-05 0.001035
GO:0030410 nicotianamine synthase activity 2.2% (2/91) 8.13 1.7e-05 0.001035
GO:0030417 nicotianamine metabolic process 2.2% (2/91) 8.13 1.7e-05 0.001035
GO:0030418 nicotianamine biosynthetic process 2.2% (2/91) 8.13 1.7e-05 0.001035
GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity 2.2% (2/91) 7.72 3.3e-05 0.001654
GO:0080162 endoplasmic reticulum to cytosol auxin transport 2.2% (2/91) 6.91 0.000116 0.004115
GO:0072350 tricarboxylic acid metabolic process 2.2% (2/91) 6.91 0.000116 0.004115
GO:0060918 auxin transport 2.2% (2/91) 6.55 0.000198 0.005469
GO:0009914 hormone transport 2.2% (2/91) 6.55 0.000198 0.005469
GO:0022900 electron transport chain 3.3% (3/91) 4.45 0.000363 0.00693
GO:0055085 transmembrane transport 9.89% (9/91) 2.08 0.00029 0.007203
GO:0065008 regulation of biological quality 3.3% (3/91) 4.5 0.000327 0.007383
GO:0046873 metal ion transmembrane transporter activity 4.4% (4/91) 3.53 0.000417 0.007392
GO:0030001 metal ion transport 4.4% (4/91) 3.5 0.000451 0.00745
GO:0009767 photosynthetic electron transport chain 2.2% (2/91) 6.13 0.000362 0.007485
GO:0006810 transport 12.09% (11/91) 1.64 0.000808 0.012524
GO:0009309 amine biosynthetic process 2.2% (2/91) 5.4 0.00103 0.012771
GO:0042401 biogenic amine biosynthetic process 2.2% (2/91) 5.4 0.00103 0.012771
GO:0051234 establishment of localization 12.09% (11/91) 1.61 0.000935 0.01364
GO:0051179 localization 12.09% (11/91) 1.59 0.001023 0.014097
GO:0022857 transmembrane transporter activity 9.89% (9/91) 1.78 0.001236 0.014601
GO:0005215 transporter activity 9.89% (9/91) 1.75 0.001425 0.016068
GO:0016020 membrane 9.89% (9/91) 1.7 0.001863 0.020084
GO:0050821 protein stabilization 1.1% (1/91) 8.72 0.002374 0.020301
GO:0042301 phosphate ion binding 1.1% (1/91) 8.72 0.002374 0.020301
GO:0031647 regulation of protein stability 1.1% (1/91) 8.72 0.002374 0.020301
GO:0016102 diterpenoid biosynthetic process 2.2% (2/91) 4.86 0.00217 0.02153
GO:0016101 diterpenoid metabolic process 2.2% (2/91) 4.86 0.00217 0.02153
GO:0022890 inorganic cation transmembrane transporter activity 4.4% (4/91) 2.87 0.002279 0.021739
GO:0009055 electron transfer activity 3.3% (3/91) 3.38 0.003044 0.022879
GO:0010817 regulation of hormone levels 2.2% (2/91) 4.63 0.002976 0.023063
GO:0006576 biogenic amine metabolic process 2.2% (2/91) 4.63 0.002976 0.023063
GO:0006812 monoatomic cation transport 4.4% (4/91) 2.76 0.002942 0.024322
GO:0008324 monoatomic cation transmembrane transporter activity 4.4% (4/91) 2.65 0.003878 0.028289
GO:0006811 monoatomic ion transport 4.4% (4/91) 2.57 0.004759 0.032784
GO:0046983 protein dimerization activity 5.49% (5/91) 2.2 0.004734 0.033547
GO:0015318 inorganic molecular entity transmembrane transporter activity 4.4% (4/91) 2.53 0.005246 0.035161
GO:0010333 terpene synthase activity 2.2% (2/91) 4.16 0.005621 0.036683
GO:0009521 photosystem 2.2% (2/91) 4.13 0.005856 0.037239
GO:0016838 carbon-oxygen lyase activity, acting on phosphates 2.2% (2/91) 4.07 0.00634 0.039309
GO:0015979 photosynthesis 2.2% (2/91) 4.02 0.006842 0.03946
GO:0006091 generation of precursor metabolites and energy 3.3% (3/91) 2.97 0.006742 0.039811
GO:0009308 amine metabolic process 2.2% (2/91) 4.05 0.006589 0.039855
GO:0009772 photosynthetic electron transport in photosystem II 1.1% (1/91) 7.13 0.007105 0.040046
GO:0015075 monoatomic ion transmembrane transporter activity 4.4% (4/91) 2.37 0.007687 0.042362
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (91) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms