Coexpression cluster: Cluster_129 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046271 phenylpropanoid catabolic process 5.33% (4/75) 6.04 0.0 1.4e-05
GO:0052716 hydroquinone:oxygen oxidoreductase activity 5.33% (4/75) 6.04 0.0 1.4e-05
GO:0046274 lignin catabolic process 5.33% (4/75) 6.04 0.0 1.4e-05
GO:0009808 lignin metabolic process 5.33% (4/75) 6.04 0.0 1.4e-05
GO:0009698 phenylpropanoid metabolic process 5.33% (4/75) 6.04 0.0 1.4e-05
GO:0019748 secondary metabolic process 5.33% (4/75) 5.87 1e-06 2e-05
GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor 5.33% (4/75) 5.64 1e-06 3.3e-05
GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors 5.33% (4/75) 5.57 2e-06 3.6e-05
GO:0005576 extracellular region 8.0% (6/75) 4.05 2e-06 3.6e-05
GO:0003824 catalytic activity 48.0% (36/75) 1.04 3e-06 4.8e-05
GO:0048046 apoplast 6.67% (5/75) 5.23 0.0 4.9e-05
GO:0016788 hydrolase activity, acting on ester bonds 13.33% (10/75) 2.72 3e-06 5.1e-05
GO:0044248 cellular catabolic process 9.33% (7/75) 3.27 8e-06 0.000131
GO:0016491 oxidoreductase activity 17.33% (13/75) 2.03 1.5e-05 0.000216
GO:1901575 organic substance catabolic process 10.67% (8/75) 2.83 1.7e-05 0.000233
GO:0009056 catabolic process 10.67% (8/75) 2.78 2.2e-05 0.000282
GO:0005507 copper ion binding 5.33% (4/75) 4.44 3.6e-05 0.000435
GO:0016787 hydrolase activity 21.33% (16/75) 1.63 4.2e-05 0.000481
GO:0006869 lipid transport 4.0% (3/75) 4.52 0.000315 0.003074
GO:1901361 organic cyclic compound catabolic process 5.33% (4/75) 3.64 0.00031 0.003176
GO:0019439 aromatic compound catabolic process 5.33% (4/75) 3.66 0.000296 0.003191
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 6.67% (5/75) 2.62 0.00136 0.012676
GO:0110165 cellular anatomical entity 17.33% (13/75) 1.35 0.001569 0.013982
GO:0016798 hydrolase activity, acting on glycosyl bonds 6.67% (5/75) 2.46 0.002231 0.019058
GO:0042744 hydrogen peroxide catabolic process 4.0% (3/75) 3.33 0.003349 0.026407
GO:0042743 hydrogen peroxide metabolic process 4.0% (3/75) 3.33 0.003349 0.026407
GO:0072593 reactive oxygen species metabolic process 4.0% (3/75) 3.22 0.004143 0.031456
GO:0003674 molecular_function 61.33% (46/75) 0.43 0.004575 0.033493
GO:0046906 tetrapyrrole binding 6.67% (5/75) 2.17 0.005208 0.035586
GO:0020037 heme binding 6.67% (5/75) 2.17 0.00517 0.036545
GO:0015928 fucosidase activity 1.33% (1/75) 7.41 0.005858 0.037529
GO:0004560 alpha-L-fucosidase activity 1.33% (1/75) 7.41 0.005858 0.037529
GO:0006979 response to oxidative stress 4.0% (3/75) 3.03 0.00605 0.037585
GO:0004601 peroxidase activity 4.0% (3/75) 2.99 0.006503 0.038091
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 4.0% (3/75) 2.99 0.006503 0.038091
GO:0015908 fatty acid transport 1.33% (1/75) 6.68 0.009745 0.043428
GO:0015909 long-chain fatty acid transport 1.33% (1/75) 6.68 0.009745 0.043428
GO:0007623 circadian rhythm 1.33% (1/75) 6.68 0.009745 0.043428
GO:1903963 arachidonate transport 1.33% (1/75) 6.68 0.009745 0.043428
GO:0071715 icosanoid transport 1.33% (1/75) 6.68 0.009745 0.043428
GO:0032309 icosanoid secretion 1.33% (1/75) 6.68 0.009745 0.043428
GO:0050482 arachidonic acid secretion 1.33% (1/75) 6.68 0.009745 0.043428
GO:0004623 phospholipase A2 activity 1.33% (1/75) 6.68 0.009745 0.043428
GO:0048511 rhythmic process 1.33% (1/75) 6.68 0.009745 0.043428
GO:0072330 monocarboxylic acid biosynthetic process 2.67% (2/75) 3.68 0.010815 0.047171
GO:0005975 carbohydrate metabolic process 6.67% (5/75) 1.89 0.011363 0.048529
GO:0016209 antioxidant activity 4.0% (3/75) 2.84 0.008624 0.04911
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (75) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms