Coexpression cluster: Cluster_419 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0045814 negative regulation of gene expression, epigenetic 50.0% (1/2) 9.47 0.001408 0.007242
GO:0031507 heterochromatin formation 50.0% (1/2) 9.47 0.001408 0.007242
GO:0070828 heterochromatin organization 50.0% (1/2) 9.47 0.001408 0.007242
GO:0031047 regulatory ncRNA-mediated gene silencing 50.0% (1/2) 9.27 0.001617 0.007275
GO:0040029 epigenetic regulation of gene expression 50.0% (1/2) 9.1 0.001825 0.007301
GO:0080188 gene silencing by RNA-directed DNA methylation 50.0% (1/2) 9.64 0.001252 0.011266
GO:0006346 DNA methylation-dependent heterochromatin formation 50.0% (1/2) 9.64 0.001252 0.011266
GO:0031048 regulatory ncRNA-mediated heterochromatin formation 50.0% (1/2) 9.64 0.001252 0.011266
GO:0140718 facultative heterochromatin formation 50.0% (1/2) 9.64 0.001252 0.011266
GO:0006338 chromatin remodeling 50.0% (1/2) 8.1 0.003649 0.013136
GO:0006325 chromatin organization 50.0% (1/2) 7.94 0.004065 0.013305
GO:0010629 negative regulation of gene expression 50.0% (1/2) 7.8 0.004482 0.013446
GO:0071824 protein-DNA complex organization 50.0% (1/2) 7.67 0.004898 0.013565
GO:0010605 negative regulation of macromolecule metabolic process 50.0% (1/2) 6.96 0.008019 0.015193
GO:0009892 negative regulation of metabolic process 50.0% (1/2) 6.96 0.008019 0.015193
GO:0009890 negative regulation of biosynthetic process 50.0% (1/2) 7.16 0.006979 0.015703
GO:0010558 negative regulation of macromolecule biosynthetic process 50.0% (1/2) 7.16 0.006979 0.015703
GO:0031327 negative regulation of cellular biosynthetic process 50.0% (1/2) 7.16 0.006979 0.015703
GO:0031324 negative regulation of cellular metabolic process 50.0% (1/2) 6.99 0.007863 0.01665
GO:0048523 negative regulation of cellular process 50.0% (1/2) 6.58 0.010459 0.018827
GO:0048519 negative regulation of biological process 50.0% (1/2) 6.48 0.011134 0.019087
GO:0043933 protein-containing complex organization 50.0% (1/2) 6.33 0.012379 0.020256
GO:0016043 cellular component organization 50.0% (1/2) 4.96 0.031778 0.04974
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms