Coexpression cluster: Cluster_132 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0031012 extracellular matrix 2.47% (2/81) 7.56 4.4e-05 0.009574
GO:0009607 response to biotic stimulus 3.7% (3/81) 3.93 0.001028 0.022419
GO:0044419 biological process involved in interspecies interaction between organisms 3.7% (3/81) 3.93 0.001028 0.022419
GO:0043207 response to external biotic stimulus 3.7% (3/81) 3.95 0.000997 0.027161
GO:0051707 response to other organism 3.7% (3/81) 3.95 0.000997 0.027161
GO:0019219 regulation of nucleobase-containing compound metabolic process 11.11% (9/81) 1.65 0.002243 0.034934
GO:0031326 regulation of cellular biosynthetic process 11.11% (9/81) 1.54 0.003714 0.035198
GO:0009889 regulation of biosynthetic process 11.11% (9/81) 1.54 0.003714 0.035198
GO:0050794 regulation of cellular process 13.58% (11/81) 1.33 0.004096 0.035715
GO:0003677 DNA binding 11.11% (9/81) 1.53 0.003934 0.035738
GO:0051252 regulation of RNA metabolic process 11.11% (9/81) 1.66 0.002134 0.035792
GO:0140110 transcription regulator activity 9.88% (8/81) 1.97 0.00099 0.035964
GO:0060255 regulation of macromolecule metabolic process 11.11% (9/81) 1.48 0.004965 0.03608
GO:0005516 calmodulin binding 2.47% (2/81) 4.76 0.002508 0.036445
GO:0031323 regulation of cellular metabolic process 11.11% (9/81) 1.48 0.004882 0.036701
GO:2001141 regulation of RNA biosynthetic process 11.11% (9/81) 1.67 0.00204 0.037058
GO:0006355 regulation of DNA-templated transcription 11.11% (9/81) 1.67 0.00204 0.037058
GO:0019222 regulation of metabolic process 11.11% (9/81) 1.46 0.00533 0.037481
GO:0004222 metalloendopeptidase activity 2.47% (2/81) 4.27 0.004863 0.037858
GO:0019538 protein metabolic process 17.28% (14/81) 1.11 0.004722 0.038125
GO:0010556 regulation of macromolecule biosynthetic process 11.11% (9/81) 1.54 0.00368 0.038206
GO:0043565 sequence-specific DNA binding 6.17% (5/81) 2.83 0.000717 0.039065
GO:0004175 endopeptidase activity 4.94% (4/81) 2.57 0.004684 0.039275
GO:0080090 regulation of primary metabolic process 11.11% (9/81) 1.56 0.00344 0.039464
GO:0010468 regulation of gene expression 11.11% (9/81) 1.55 0.003648 0.039759
GO:0140096 catalytic activity, acting on a protein 17.28% (14/81) 1.37 0.000918 0.040006
GO:0051171 regulation of nitrogen compound metabolic process 11.11% (9/81) 1.56 0.003377 0.040905
GO:0030312 external encapsulating structure 2.47% (2/81) 4.56 0.003265 0.041869
GO:0050789 regulation of biological process 13.58% (11/81) 1.25 0.006386 0.042184
GO:0009605 response to external stimulus 3.7% (3/81) 3.37 0.003108 0.042352
GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity 1.23% (1/81) 7.3 0.006326 0.043095
GO:0003700 DNA-binding transcription factor activity 9.88% (8/81) 2.07 0.000645 0.04684
GO:0065007 biological regulation 13.58% (11/81) 1.21 0.007662 0.049126
GO:0009873 ethylene-activated signaling pathway 2.47% (2/81) 3.91 0.007923 0.049346
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (81) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms