Coexpression cluster: Cluster_55 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0000373 Group II intron splicing 1.51% (4/265) 6.18 0.0 8.3e-05
GO:0034309 primary alcohol biosynthetic process 1.13% (3/265) 6.44 3e-06 0.000587
GO:0009228 thiamine biosynthetic process 1.13% (3/265) 6.44 3e-06 0.000587
GO:0042724 thiamine-containing compound biosynthetic process 1.13% (3/265) 5.76 1.8e-05 0.001388
GO:0006772 thiamine metabolic process 1.13% (3/265) 5.76 1.8e-05 0.001388
GO:0042723 thiamine-containing compound metabolic process 1.13% (3/265) 5.76 1.8e-05 0.001388
GO:0005506 iron ion binding 4.91% (13/265) 2.11 1.3e-05 0.001776
GO:0034308 primary alcohol metabolic process 1.13% (3/265) 5.59 2.7e-05 0.001813
GO:0004497 monooxygenase activity 4.53% (12/265) 2.08 3.4e-05 0.002036
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 4.53% (12/265) 2.03 4.6e-05 0.00253
GO:0044272 sulfur compound biosynthetic process 1.89% (5/265) 3.59 6.1e-05 0.003016
GO:0032954 regulation of cytokinetic process 0.75% (2/265) 6.59 0.000142 0.005166
GO:0032955 regulation of division septum assembly 0.75% (2/265) 6.59 0.000142 0.005166
GO:1901891 regulation of cell septum assembly 0.75% (2/265) 6.59 0.000142 0.005166
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides 1.51% (4/265) 3.97 0.000123 0.005596
GO:0046165 alcohol biosynthetic process 1.13% (3/265) 4.67 0.000207 0.007042
GO:0003723 RNA binding 5.66% (15/265) 1.54 0.000238 0.00764
GO:0051540 metal cluster binding 1.89% (5/265) 3.09 0.000318 0.009113
GO:0051536 iron-sulfur cluster binding 1.89% (5/265) 3.09 0.000318 0.009113
GO:0046914 transition metal ion binding 7.55% (20/265) 1.24 0.000364 0.00993
GO:0046906 tetrapyrrole binding 4.53% (12/265) 1.61 0.00067 0.016609
GO:0020037 heme binding 4.53% (12/265) 1.61 0.00066 0.017136
GO:0006790 sulfur compound metabolic process 1.89% (5/265) 2.81 0.000767 0.01741
GO:1901617 organic hydroxy compound biosynthetic process 1.13% (3/265) 4.06 0.000755 0.017889
GO:0140098 catalytic activity, acting on RNA 3.4% (9/265) 1.84 0.001053 0.022072
GO:0004045 aminoacyl-tRNA hydrolase activity 0.75% (2/265) 5.18 0.001297 0.022089
GO:0042752 regulation of circadian rhythm 0.75% (2/265) 5.18 0.001297 0.022089
GO:0006396 RNA processing 3.4% (9/265) 1.83 0.001115 0.0225
GO:0042364 water-soluble vitamin biosynthetic process 1.13% (3/265) 3.9 0.001045 0.022778
GO:0009266 response to temperature stimulus 1.13% (3/265) 3.76 0.001397 0.023068
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 1.51% (4/265) 3.09 0.001285 0.023342
GO:0006767 water-soluble vitamin metabolic process 1.13% (3/265) 3.81 0.001272 0.023911
GO:0009110 vitamin biosynthetic process 1.13% (3/265) 3.81 0.001272 0.023911
GO:0006766 vitamin metabolic process 1.13% (3/265) 3.72 0.001529 0.024504
GO:0016744 transketolase or transaldolase activity 0.75% (2/265) 4.85 0.002065 0.030423
GO:0009409 response to cold 0.75% (2/265) 4.85 0.002065 0.030423
GO:0008173 RNA methyltransferase activity 1.13% (3/265) 3.59 0.00197 0.030679
GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile 1.51% (4/265) 2.82 0.002559 0.035766
GO:0046872 metal ion binding 9.43% (25/265) 0.88 0.002554 0.036635
GO:0000375 RNA splicing, via transesterification reactions 1.51% (4/265) 2.75 0.003041 0.041439
GO:0070006 metalloaminopeptidase activity 0.75% (2/265) 4.48 0.003531 0.046942
GO:0051301 cell division 0.75% (2/265) 4.37 0.004101 0.047557
GO:0009628 response to abiotic stimulus 1.51% (4/265) 2.64 0.004028 0.047719
GO:0043169 cation binding 9.43% (25/265) 0.84 0.00379 0.048037
GO:0072527 pyrimidine-containing compound metabolic process 1.13% (3/265) 3.21 0.004231 0.048044
GO:0006066 alcohol metabolic process 1.13% (3/265) 3.24 0.003981 0.04822
GO:0072528 pyrimidine-containing compound biosynthetic process 1.13% (3/265) 3.27 0.003741 0.04854
GO:0016741 transferase activity, transferring one-carbon groups 2.64% (7/265) 1.82 0.00394 0.048802
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (265) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms