Coexpression cluster: Cluster_29 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0030243 cellulose metabolic process 4.4% (4/91) 5.55 2e-06 9.5e-05
GO:0030244 cellulose biosynthetic process 4.4% (4/91) 5.59 1e-06 0.000106
GO:0008194 UDP-glycosyltransferase activity 8.79% (8/91) 3.33 1e-06 0.000139
GO:0016760 cellulose synthase (UDP-forming) activity 4.4% (4/91) 5.72 1e-06 0.000146
GO:0016759 cellulose synthase activity 4.4% (4/91) 5.72 1e-06 0.000146
GO:0051273 beta-glucan metabolic process 4.4% (4/91) 5.16 5e-06 0.000176
GO:0016757 glycosyltransferase activity 10.99% (10/91) 2.68 4e-06 0.000178
GO:0051274 beta-glucan biosynthetic process 4.4% (4/91) 5.19 4e-06 0.000184
GO:0009250 glucan biosynthetic process 4.4% (4/91) 4.86 1.1e-05 0.000364
GO:0000271 polysaccharide biosynthetic process 4.4% (4/91) 4.67 1.9e-05 0.000499
GO:0035251 UDP-glucosyltransferase activity 4.4% (4/91) 4.7 1.8e-05 0.000517
GO:0016758 hexosyltransferase activity 6.59% (6/91) 3.37 2.7e-05 0.000649
GO:0044042 glucan metabolic process 4.4% (4/91) 4.19 7.1e-05 0.001562
GO:0016051 carbohydrate biosynthetic process 4.4% (4/91) 4.09 9.4e-05 0.00193
GO:0046527 glucosyltransferase activity 4.4% (4/91) 4.03 0.00011 0.0021
GO:0010215 cellulose microfibril organization 2.2% (2/91) 6.4 0.000248 0.003232
GO:0043062 extracellular structure organization 2.2% (2/91) 6.4 0.000248 0.003232
GO:0030198 extracellular matrix organization 2.2% (2/91) 6.4 0.000248 0.003232
GO:0031225 obsolete anchored component of membrane 2.2% (2/91) 6.4 0.000248 0.003232
GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity 2.2% (2/91) 6.4 0.000248 0.003232
GO:0003824 catalytic activity 40.66% (37/91) 0.8 0.000185 0.003324
GO:0016841 ammonia-lyase activity 2.2% (2/91) 6.26 0.000302 0.003772
GO:0005976 polysaccharide metabolic process 4.4% (4/91) 3.75 0.000231 0.003904
GO:0009072 aromatic amino acid metabolic process 3.3% (3/91) 4.45 0.000363 0.00401
GO:1902222 erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process 2.2% (2/91) 6.13 0.000362 0.004158
GO:0006559 L-phenylalanine catabolic process 2.2% (2/91) 6.13 0.000362 0.004158
GO:0009074 aromatic amino acid family catabolic process 2.2% (2/91) 5.72 0.000654 0.006957
GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process 2.2% (2/91) 5.55 0.000832 0.008233
GO:0006558 L-phenylalanine metabolic process 2.2% (2/91) 5.55 0.000832 0.008233
GO:0005975 carbohydrate metabolic process 7.69% (7/91) 2.1 0.001291 0.012354
GO:0015020 glucuronosyltransferase activity 2.2% (2/91) 5.13 0.001487 0.013765
GO:1901606 alpha-amino acid catabolic process 2.2% (2/91) 5.02 0.001745 0.015654
GO:0009063 amino acid catabolic process 2.2% (2/91) 4.96 0.001882 0.015887
GO:0016020 membrane 9.89% (9/91) 1.7 0.001863 0.016199
GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor 2.2% (2/91) 4.81 0.002322 0.019039
GO:0016054 organic acid catabolic process 2.2% (2/91) 4.4 0.0041 0.0318
GO:0046395 carboxylic acid catabolic process 2.2% (2/91) 4.4 0.0041 0.0318
GO:1901605 alpha-amino acid metabolic process 3.3% (3/91) 3.1 0.005246 0.038604
GO:0016491 oxidoreductase activity 10.99% (10/91) 1.38 0.005171 0.039055
GO:0008977 prephenate dehydrogenase (NAD+) activity 1.1% (1/91) 7.13 0.007105 0.043385
GO:0006571 tyrosine biosynthetic process 1.1% (1/91) 7.13 0.007105 0.043385
GO:0033730 arogenate dehydrogenase (NADP+) activity 1.1% (1/91) 7.13 0.007105 0.043385
GO:0033731 arogenate dehydrogenase [NAD(P)+] activity 1.1% (1/91) 7.13 0.007105 0.043385
GO:0004665 prephenate dehydrogenase (NADP+) activity 1.1% (1/91) 7.13 0.007105 0.043385
GO:0016840 carbon-nitrogen lyase activity 2.2% (2/91) 4.05 0.006589 0.047275
GO:0044282 small molecule catabolic process 2.2% (2/91) 4.02 0.006842 0.047893
GO:1901565 organonitrogen compound catabolic process 3.3% (3/91) 2.95 0.007092 0.048464
GO:0008080 N-acetyltransferase activity 2.2% (2/91) 3.89 0.008172 0.048862
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (91) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms