Coexpression cluster: Cluster_12 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0016192 vesicle-mediated transport 15.32% (17/111) 4.6 0.0 0.0
GO:0051649 establishment of localization in cell 9.91% (11/111) 3.94 0.0 0.0
GO:0015031 protein transport 9.01% (10/111) 3.98 0.0 0.0
GO:0006886 intracellular protein transport 8.11% (9/111) 4.34 0.0 0.0
GO:0033036 macromolecule localization 9.01% (10/111) 3.79 0.0 0.0
GO:0008104 protein localization 9.01% (10/111) 3.79 0.0 0.0
GO:0070727 cellular macromolecule localization 9.01% (10/111) 3.79 0.0 0.0
GO:0045184 establishment of protein localization 9.01% (10/111) 3.82 0.0 0.0
GO:0046907 intracellular transport 9.01% (10/111) 3.82 0.0 0.0
GO:0051641 cellular localization 9.91% (11/111) 3.48 0.0 0.0
GO:0051234 establishment of localization 18.02% (20/111) 2.19 0.0 0.0
GO:0051179 localization 18.02% (20/111) 2.17 0.0 1e-06
GO:0032991 protein-containing complex 15.32% (17/111) 2.35 0.0 1e-06
GO:0071705 nitrogen compound transport 9.01% (10/111) 3.38 0.0 1e-06
GO:0006810 transport 17.12% (19/111) 2.14 0.0 1e-06
GO:0030117 membrane coat 4.5% (5/111) 5.29 0.0 4e-06
GO:0071702 organic substance transport 9.01% (10/111) 2.96 1e-06 1.5e-05
GO:0005515 protein binding 26.13% (29/111) 1.26 6e-06 0.000127
GO:0003674 molecular_function 66.67% (74/111) 0.55 6e-06 0.000128
GO:0098796 membrane protein complex 6.31% (7/111) 3.24 1e-05 0.000192
GO:0005488 binding 48.65% (54/111) 0.74 1.1e-05 0.000201
GO:0000145 exocyst 3.6% (4/111) 4.68 1.9e-05 0.000294
GO:0032940 secretion by cell 3.6% (4/111) 4.68 1.9e-05 0.000294
GO:0006887 exocytosis 3.6% (4/111) 4.7 1.7e-05 0.000298
GO:0009987 cellular process 35.14% (39/111) 0.93 2.3e-05 0.000349
GO:0046903 secretion 3.6% (4/111) 4.55 2.7e-05 0.000387
GO:0048193 Golgi vesicle transport 3.6% (4/111) 4.45 3.5e-05 0.000483
GO:0099023 vesicle tethering complex 3.6% (4/111) 4.32 5e-05 0.000667
GO:0030120 vesicle coat 2.7% (3/111) 5.11 9.1e-05 0.001172
GO:0098657 import into cell 1.8% (2/111) 6.85 0.000124 0.001496
GO:0006897 endocytosis 1.8% (2/111) 6.85 0.000124 0.001496
GO:0030674 protein-macromolecule adaptor activity 2.7% (3/111) 4.89 0.000145 0.001694
GO:0060090 molecular adaptor activity 2.7% (3/111) 4.81 0.000171 0.001942
GO:0140352 export from cell 3.6% (4/111) 3.5 0.00045 0.004818
GO:0005794 Golgi apparatus 1.8% (2/111) 5.97 0.000449 0.004955
GO:0030131 clathrin adaptor complex 1.8% (2/111) 5.62 0.000739 0.007699
GO:0005575 cellular_component 18.92% (21/111) 1.03 0.001222 0.012386
GO:0030119 AP-type membrane coat adaptor complex 1.8% (2/111) 5.18 0.001376 0.013577
GO:0043130 ubiquitin binding 1.8% (2/111) 4.97 0.001848 0.017326
GO:0032182 ubiquitin-like protein binding 1.8% (2/111) 4.97 0.001848 0.017326
GO:0016197 endosomal transport 1.8% (2/111) 4.91 0.00202 0.018478
GO:0098797 plasma membrane protein complex 1.8% (2/111) 4.85 0.0022 0.019641
GO:0030906 retromer, cargo-selective complex 0.9% (1/111) 8.43 0.002896 0.021717
GO:0005965 protein farnesyltransferase complex 0.9% (1/111) 8.43 0.002896 0.021717
GO:0006893 Golgi to plasma membrane transport 0.9% (1/111) 8.43 0.002896 0.021717
GO:0009904 chloroplast accumulation movement 0.9% (1/111) 8.43 0.002896 0.021717
GO:0097361 CIA complex 0.9% (1/111) 8.43 0.002896 0.021717
GO:0006892 post-Golgi vesicle-mediated transport 0.9% (1/111) 8.43 0.002896 0.021717
GO:0018343 protein farnesylation 0.9% (1/111) 8.43 0.002896 0.021717
GO:0033699 DNA 5'-adenosine monophosphate hydrolase activity 0.9% (1/111) 8.43 0.002896 0.021717
GO:0005484 SNAP receptor activity 1.8% (2/111) 4.53 0.003428 0.025206
GO:0016409 palmitoyltransferase activity 1.8% (2/111) 4.48 0.003658 0.025879
GO:0003682 chromatin binding 1.8% (2/111) 4.48 0.003658 0.025879
GO:0044877 protein-containing complex binding 2.7% (3/111) 3.22 0.004177 0.029006
GO:0006370 7-methylguanosine mRNA capping 0.9% (1/111) 7.43 0.005783 0.035551
GO:0032051 clathrin light chain binding 0.9% (1/111) 7.43 0.005783 0.035551
GO:0071439 clathrin complex 0.9% (1/111) 7.43 0.005783 0.035551
GO:0008174 mRNA methyltransferase activity 0.9% (1/111) 7.43 0.005783 0.035551
GO:0098876 vesicle-mediated transport to the plasma membrane 0.9% (1/111) 7.43 0.005783 0.035551
GO:0004482 mRNA 5'-cap (guanine-N7-)-methyltransferase activity 0.9% (1/111) 7.43 0.005783 0.035551
GO:0008150 biological_process 42.34% (47/111) 0.47 0.005625 0.038355
GO:0051667 establishment of plastid localization 0.9% (1/111) 6.85 0.008662 0.047768
GO:0051644 plastid localization 0.9% (1/111) 6.85 0.008662 0.047768
GO:0009902 chloroplast relocation 0.9% (1/111) 6.85 0.008662 0.047768
GO:0006898 receptor-mediated endocytosis 0.9% (1/111) 6.85 0.008662 0.047768
GO:0019750 chloroplast localization 0.9% (1/111) 6.85 0.008662 0.047768
GO:0030122 AP-2 adaptor complex 0.9% (1/111) 6.85 0.008662 0.047768
GO:0072583 clathrin-dependent endocytosis 0.9% (1/111) 6.85 0.008662 0.047768
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (111) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms