Coexpression cluster: Cluster_433 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009059 macromolecule biosynthetic process 75.0% (3/4) 5.45 2e-05 0.00175
GO:0044237 cellular metabolic process 100.0% (4/4) 3.07 0.000201 0.002946
GO:0009058 biosynthetic process 75.0% (3/4) 4.25 0.000236 0.002971
GO:1901576 organic substance biosynthetic process 75.0% (3/4) 4.37 0.000185 0.003251
GO:0043170 macromolecule metabolic process 100.0% (4/4) 3.16 0.000155 0.003408
GO:0043228 non-membrane-bounded organelle 50.0% (2/4) 5.52 0.000701 0.003429
GO:0043232 intracellular non-membrane-bounded organelle 50.0% (2/4) 5.52 0.000701 0.003429
GO:0071704 organic substance metabolic process 100.0% (4/4) 2.59 0.000751 0.00348
GO:0043604 amide biosynthetic process 50.0% (2/4) 5.68 0.000559 0.003515
GO:0043043 peptide biosynthetic process 50.0% (2/4) 5.79 0.000484 0.003552
GO:0006518 peptide metabolic process 50.0% (2/4) 5.71 0.000542 0.003666
GO:0005198 structural molecule activity 50.0% (2/4) 5.59 0.000633 0.003714
GO:0043603 amide metabolic process 50.0% (2/4) 5.53 0.000688 0.003785
GO:0003735 structural constituent of ribosome 50.0% (2/4) 5.8 0.000476 0.003809
GO:0034641 cellular nitrogen compound metabolic process 75.0% (3/4) 3.99 0.000404 0.003946
GO:0006412 translation 50.0% (2/4) 5.82 0.000462 0.004069
GO:0008152 metabolic process 100.0% (4/4) 2.51 0.000957 0.004209
GO:0044249 cellular biosynthetic process 75.0% (3/4) 4.48 0.000149 0.004369
GO:0005840 ribosome 50.0% (2/4) 5.93 0.000399 0.004394
GO:0009987 cellular process 100.0% (4/4) 2.44 0.001164 0.004878
GO:1990904 ribonucleoprotein complex 50.0% (2/4) 6.76 0.000126 0.005563
GO:0000387 spliceosomal snRNP assembly 25.0% (1/4) 9.42 0.00146 0.00584
GO:0022625 cytosolic large ribosomal subunit 25.0% (1/4) 9.23 0.001669 0.006384
GO:1901566 organonitrogen compound biosynthetic process 50.0% (2/4) 4.77 0.001955 0.007169
GO:0044271 cellular nitrogen compound biosynthetic process 50.0% (2/4) 4.58 0.002557 0.008654
GO:0005681 spliceosomal complex 25.0% (1/4) 8.64 0.002502 0.008807
GO:0003746 translation elongation factor activity 25.0% (1/4) 8.37 0.003023 0.009172
GO:0005575 cellular_component 75.0% (3/4) 3.02 0.002959 0.0093
GO:0022618 protein-RNA complex assembly 25.0% (1/4) 8.42 0.002919 0.009512
GO:0006414 translational elongation 25.0% (1/4) 8.1 0.003647 0.009726
GO:0071826 protein-RNA complex organization 25.0% (1/4) 8.23 0.003335 0.009783
GO:0043226 organelle 50.0% (2/4) 4.33 0.003561 0.009792
GO:0043229 intracellular organelle 50.0% (2/4) 4.33 0.003561 0.009792
GO:0015934 large ribosomal subunit 25.0% (1/4) 7.64 0.004999 0.01294
GO:0032991 protein-containing complex 50.0% (2/4) 4.06 0.005191 0.013052
GO:0006807 nitrogen compound metabolic process 75.0% (3/4) 2.58 0.007198 0.017595
GO:0044391 ribosomal subunit 25.0% (1/4) 6.98 0.007907 0.018806
GO:0008135 translation factor activity, RNA binding 25.0% (1/4) 6.78 0.009048 0.019905
GO:0090079 translation regulator activity, nucleic acid binding 25.0% (1/4) 6.78 0.009048 0.019905
GO:0008150 biological_process 100.0% (4/4) 1.71 0.008719 0.020192
GO:0045182 translation regulator activity 25.0% (1/4) 6.69 0.009669 0.020754
GO:0044238 primary metabolic process 75.0% (3/4) 2.3 0.012572 0.026341
GO:0065003 protein-containing complex assembly 25.0% (1/4) 5.99 0.015664 0.032057
GO:0003924 GTPase activity 25.0% (1/4) 5.64 0.019885 0.03977
GO:0022607 cellular component assembly 25.0% (1/4) 5.55 0.021118 0.041298
GO:0019001 guanyl nucleotide binding 25.0% (1/4) 5.33 0.024707 0.044373
GO:0110165 cellular anatomical entity 50.0% (2/4) 2.87 0.025402 0.044707
GO:0032561 guanyl ribonucleotide binding 25.0% (1/4) 5.37 0.023888 0.044726
GO:0005525 GTP binding 25.0% (1/4) 5.37 0.023888 0.044726
GO:0003676 nucleic acid binding 50.0% (2/4) 2.85 0.026129 0.045085
GO:0043933 protein-containing complex organization 25.0% (1/4) 5.33 0.024605 0.045109
GO:0140513 nuclear protein-containing complex 25.0% (1/4) 5.17 0.027572 0.04666
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms