Coexpression cluster: Cluster_34 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005991 trehalose metabolic process 2.78% (4/144) 5.66 1e-06 0.000336
GO:0009311 oligosaccharide metabolic process 2.78% (4/144) 4.89 1e-05 0.001055
GO:0005984 disaccharide metabolic process 2.78% (4/144) 4.97 8e-06 0.001253
GO:0005992 trehalose biosynthetic process 2.08% (3/144) 5.32 5.6e-05 0.004362
GO:0010557 positive regulation of macromolecule biosynthetic process 2.78% (4/144) 3.65 0.000305 0.005897
GO:0031328 positive regulation of cellular biosynthetic process 2.78% (4/144) 3.65 0.000305 0.005897
GO:0009891 positive regulation of biosynthetic process 2.78% (4/144) 3.65 0.000305 0.005897
GO:0009312 oligosaccharide biosynthetic process 2.08% (3/144) 4.78 0.000177 0.00682
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 2.78% (4/144) 3.7 0.000266 0.006851
GO:0140110 transcription regulator activity 8.33% (12/144) 1.73 0.000298 0.007085
GO:0051254 positive regulation of RNA metabolic process 2.78% (4/144) 3.72 0.000254 0.00713
GO:1902680 positive regulation of RNA biosynthetic process 2.78% (4/144) 3.72 0.000254 0.00713
GO:0045893 positive regulation of DNA-templated transcription 2.78% (4/144) 3.72 0.000254 0.00713
GO:0009893 positive regulation of metabolic process 2.78% (4/144) 3.37 0.000633 0.007521
GO:0004805 trehalose-phosphatase activity 1.39% (2/144) 5.73 0.000618 0.007642
GO:0048518 positive regulation of biological process 3.47% (5/144) 3.28 0.000175 0.007727
GO:0019219 regulation of nucleobase-containing compound metabolic process 9.72% (14/144) 1.46 0.000616 0.007926
GO:0031325 positive regulation of cellular metabolic process 2.78% (4/144) 3.5 0.000448 0.008144
GO:0051173 positive regulation of nitrogen compound metabolic process 2.78% (4/144) 3.38 0.00061 0.008196
GO:0010604 positive regulation of macromolecule metabolic process 2.78% (4/144) 3.38 0.00061 0.008196
GO:0003700 DNA-binding transcription factor activity 8.33% (12/144) 1.82 0.000163 0.008383
GO:0048522 positive regulation of cellular process 2.78% (4/144) 3.43 0.000545 0.008422
GO:0051252 regulation of RNA metabolic process 9.72% (14/144) 1.47 0.000573 0.008428
GO:0006355 regulation of DNA-templated transcription 9.72% (14/144) 1.48 0.000536 0.008723
GO:2001141 regulation of RNA biosynthetic process 9.72% (14/144) 1.48 0.000536 0.008723
GO:0046351 disaccharide biosynthetic process 2.08% (3/144) 4.83 0.000159 0.00981
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding 2.08% (3/144) 3.97 0.000947 0.010841
GO:0009889 regulation of biosynthetic process 9.72% (14/144) 1.35 0.001273 0.011571
GO:0031326 regulation of cellular biosynthetic process 9.72% (14/144) 1.35 0.001273 0.011571
GO:0006357 regulation of transcription by RNA polymerase II 2.78% (4/144) 3.17 0.001052 0.011607
GO:0080090 regulation of primary metabolic process 9.72% (14/144) 1.37 0.00114 0.011747
GO:0051171 regulation of nitrogen compound metabolic process 9.72% (14/144) 1.37 0.001111 0.011838
GO:0010556 regulation of macromolecule biosynthetic process 9.72% (14/144) 1.35 0.001257 0.012137
GO:0010468 regulation of gene expression 9.72% (14/144) 1.35 0.001241 0.012368
GO:0045944 positive regulation of transcription by RNA polymerase II 2.08% (3/144) 3.73 0.001519 0.013408
GO:0060255 regulation of macromolecule metabolic process 9.72% (14/144) 1.28 0.00193 0.016115
GO:0031323 regulation of cellular metabolic process 9.72% (14/144) 1.29 0.001884 0.016169
GO:0001067 transcription regulatory region nucleic acid binding 2.08% (3/144) 3.55 0.002176 0.01681
GO:0000976 transcription cis-regulatory region binding 2.08% (3/144) 3.55 0.002176 0.01681
GO:0019222 regulation of metabolic process 9.72% (14/144) 1.27 0.002135 0.01736
GO:1990837 sequence-specific double-stranded DNA binding 2.08% (3/144) 3.51 0.002364 0.017816
GO:0019203 carbohydrate phosphatase activity 1.39% (2/144) 4.66 0.002808 0.02066
GO:0004555 alpha,alpha-trehalase activity 0.69% (1/144) 8.06 0.003756 0.025794
GO:0015927 trehalase activity 0.69% (1/144) 8.06 0.003756 0.025794
GO:0050789 regulation of biological process 11.81% (17/144) 1.04 0.003721 0.026741
GO:0065007 biological regulation 11.81% (17/144) 1.01 0.00478 0.03211
GO:0050794 regulation of cellular process 11.11% (16/144) 1.04 0.004897 0.032196
GO:0016051 carbohydrate biosynthetic process 2.08% (3/144) 3.01 0.006259 0.040291
GO:0044599 AP-5 adaptor complex 0.69% (1/144) 7.06 0.007499 0.047289
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (144) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms