Coexpression cluster: Cluster_268 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0035384 thioester biosynthetic process 33.33% (1/3) 9.94 0.001017 0.005812
GO:2000895 hemicellulose catabolic process 33.33% (1/3) 9.94 0.001017 0.005812
GO:0097599 xylanase activity 33.33% (1/3) 9.94 0.001017 0.005812
GO:0045493 xylan catabolic process 33.33% (1/3) 9.94 0.001017 0.005812
GO:0044347 cell wall polysaccharide catabolic process 33.33% (1/3) 9.94 0.001017 0.005812
GO:0071616 acyl-CoA biosynthetic process 33.33% (1/3) 9.94 0.001017 0.005812
GO:0006085 acetyl-CoA biosynthetic process 33.33% (1/3) 9.94 0.001017 0.005812
GO:0009044 xylan 1,4-beta-xylosidase activity 33.33% (1/3) 9.94 0.001017 0.005812
GO:0035383 thioester metabolic process 33.33% (1/3) 9.39 0.001486 0.006605
GO:0006637 acyl-CoA metabolic process 33.33% (1/3) 9.39 0.001486 0.006605
GO:0034033 purine nucleoside bisphosphate biosynthetic process 33.33% (1/3) 9.55 0.00133 0.006649
GO:0034030 ribonucleoside bisphosphate biosynthetic process 33.33% (1/3) 9.55 0.00133 0.006649
GO:0033866 nucleoside bisphosphate biosynthetic process 33.33% (1/3) 9.55 0.00133 0.006649
GO:0006084 acetyl-CoA metabolic process 33.33% (1/3) 9.47 0.001408 0.006759
GO:0045491 xylan metabolic process 33.33% (1/3) 9.25 0.001643 0.00704
GO:0004738 pyruvate dehydrogenase activity 33.33% (1/3) 10.83 0.000548 0.008216
GO:0004739 pyruvate dehydrogenase (acetyl-transferring) activity 33.33% (1/3) 10.83 0.000548 0.008216
GO:0052646 alditol phosphate metabolic process 33.33% (1/3) 10.83 0.000548 0.008216
GO:0006072 glycerol-3-phosphate metabolic process 33.33% (1/3) 10.83 0.000548 0.008216
GO:0000272 polysaccharide catabolic process 33.33% (1/3) 8.94 0.002033 0.008414
GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor 33.33% (1/3) 10.32 0.000782 0.008535
GO:0009056 catabolic process 66.67% (2/3) 5.42 0.000717 0.008598
GO:0006086 acetyl-CoA biosynthetic process from pyruvate 33.33% (1/3) 10.18 0.000861 0.008606
GO:0005975 carbohydrate metabolic process 66.67% (2/3) 5.21 0.000956 0.008827
GO:1901575 organic substance catabolic process 66.67% (2/3) 5.47 0.000667 0.008895
GO:0033865 nucleoside bisphosphate metabolic process 33.33% (1/3) 8.64 0.002502 0.009099
GO:0033875 ribonucleoside bisphosphate metabolic process 33.33% (1/3) 8.64 0.002502 0.009099
GO:0016998 cell wall macromolecule catabolic process 33.33% (1/3) 8.64 0.002502 0.009099
GO:0034032 purine nucleoside bisphosphate metabolic process 33.33% (1/3) 8.64 0.002502 0.009099
GO:0044238 primary metabolic process 100.0% (3/3) 2.71 0.003549 0.012525
GO:0010383 cell wall polysaccharide metabolic process 33.33% (1/3) 7.94 0.004064 0.013547
GO:0010410 hemicellulose metabolic process 33.33% (1/3) 7.94 0.004064 0.013547
GO:0071704 organic substance metabolic process 100.0% (3/3) 2.59 0.004539 0.013618
GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors 33.33% (1/3) 7.89 0.00422 0.013687
GO:0044272 sulfur compound biosynthetic process 33.33% (1/3) 7.73 0.004688 0.013722
GO:1990204 oxidoreductase complex 33.33% (1/3) 7.83 0.004376 0.01382
GO:0006090 pyruvate metabolic process 33.33% (1/3) 7.49 0.005546 0.013866
GO:0044036 cell wall macromolecule metabolic process 33.33% (1/3) 7.49 0.005546 0.013866
GO:0016491 oxidoreductase activity 66.67% (2/3) 3.98 0.005229 0.013945
GO:0009152 purine ribonucleotide biosynthetic process 33.33% (1/3) 7.78 0.004532 0.013946
GO:0046390 ribose phosphate biosynthetic process 33.33% (1/3) 7.64 0.005 0.013955
GO:0009260 ribonucleotide biosynthetic process 33.33% (1/3) 7.64 0.005 0.013955
GO:0046434 organophosphate catabolic process 33.33% (1/3) 7.6 0.005156 0.014063
GO:0009331 glycerol-3-phosphate dehydrogenase complex 33.33% (1/3) 11.06 0.000469 0.014085
GO:0008152 metabolic process 100.0% (3/3) 2.51 0.005441 0.014193
GO:0006164 purine nucleotide biosynthetic process 33.33% (1/3) 7.37 0.006014 0.014728
GO:0016052 carbohydrate catabolic process 33.33% (1/3) 7.2 0.006793 0.015381
GO:1901136 carbohydrate derivative catabolic process 33.33% (1/3) 7.22 0.006715 0.015497
GO:0072522 purine-containing compound biosynthetic process 33.33% (1/3) 7.22 0.006715 0.015497
GO:0046168 glycerol-3-phosphate catabolic process 33.33% (1/3) 11.32 0.000391 0.01565
GO:0051287 NAD binding 33.33% (1/3) 7.25 0.00656 0.015743
GO:0006793 phosphorus metabolic process 66.67% (2/3) 3.72 0.007376 0.016093
GO:0006796 phosphate-containing compound metabolic process 66.67% (2/3) 3.73 0.007338 0.016307
GO:0006790 sulfur compound metabolic process 33.33% (1/3) 6.95 0.008039 0.017227
GO:1901135 carbohydrate derivative metabolic process 66.67% (2/3) 6.58 0.000145 0.017449
GO:1901293 nucleoside phosphate biosynthetic process 33.33% (1/3) 6.87 0.008506 0.017599
GO:0009165 nucleotide biosynthetic process 33.33% (1/3) 6.87 0.008506 0.017599
GO:0019637 organophosphate metabolic process 66.67% (2/3) 6.06 0.000298 0.017896
GO:1901137 carbohydrate derivative biosynthetic process 33.33% (1/3) 6.66 0.009829 0.019335
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 33.33% (1/3) 6.71 0.009518 0.019358
GO:0005976 polysaccharide metabolic process 33.33% (1/3) 6.68 0.009751 0.019502
GO:0009150 purine ribonucleotide metabolic process 33.33% (1/3) 6.6 0.010295 0.019926
GO:0009259 ribonucleotide metabolic process 33.33% (1/3) 6.53 0.010761 0.020498
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 33.33% (1/3) 6.48 0.01115 0.020584
GO:0019693 ribose phosphate metabolic process 33.33% (1/3) 6.49 0.011072 0.02076
GO:0003824 catalytic activity 100.0% (3/3) 2.1 0.012809 0.023289
GO:0006163 purine nucleotide metabolic process 33.33% (1/3) 6.24 0.013168 0.023584
GO:0072521 purine-containing compound metabolic process 33.33% (1/3) 6.16 0.013943 0.024606
GO:0090407 organophosphate biosynthetic process 33.33% (1/3) 6.02 0.015338 0.026294
GO:0032787 monocarboxylic acid metabolic process 33.33% (1/3) 6.02 0.015338 0.026294
GO:0009117 nucleotide metabolic process 33.33% (1/3) 5.98 0.015726 0.026579
GO:0006753 nucleoside phosphate metabolic process 33.33% (1/3) 5.95 0.016035 0.026726
GO:0055086 nucleobase-containing small molecule metabolic process 33.33% (1/3) 5.69 0.019284 0.031271
GO:0009057 macromolecule catabolic process 33.33% (1/3) 5.7 0.019129 0.031445
GO:0005575 cellular_component 66.67% (2/3) 2.85 0.024161 0.038657
GO:1902494 catalytic complex 33.33% (1/3) 5.26 0.025835 0.040793
GO:0034654 nucleobase-containing compound biosynthetic process 33.33% (1/3) 5.21 0.026835 0.04182
GO:0008150 biological_process 100.0% (3/3) 1.71 0.028536 0.043902
GO:0043604 amide biosynthetic process 33.33% (1/3) 5.1 0.028908 0.043911
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds 33.33% (1/3) 4.94 0.032205 0.047711
GO:0043603 amide metabolic process 33.33% (1/3) 4.95 0.032052 0.048077
GO:0019438 aromatic compound biosynthetic process 33.33% (1/3) 4.87 0.033735 0.049369
GO:0018130 heterocycle biosynthetic process 33.33% (1/3) 4.85 0.034347 0.049659
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms