Coexpression cluster: Cluster_181 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 25.0% (15/60) 1.85 1e-05 0.002947
GO:0003729 mRNA binding 5.0% (3/60) 5.2 7.6e-05 0.007246
GO:0003674 molecular_function 70.0% (42/60) 0.62 0.00012 0.008518
GO:0003723 RNA binding 11.67% (7/60) 2.59 0.00016 0.009092
GO:0005488 binding 53.33% (32/60) 0.87 7.3e-05 0.010437
GO:0031326 regulation of cellular biosynthetic process 15.0% (9/60) 1.97 0.000429 0.013574
GO:0009889 regulation of biosynthetic process 15.0% (9/60) 1.97 0.000429 0.013574
GO:0019222 regulation of metabolic process 15.0% (9/60) 1.89 0.000641 0.015214
GO:0060255 regulation of macromolecule metabolic process 15.0% (9/60) 1.91 0.000592 0.015336
GO:0031323 regulation of cellular metabolic process 15.0% (9/60) 1.91 0.000581 0.016556
GO:0010556 regulation of macromolecule biosynthetic process 15.0% (9/60) 1.98 0.000424 0.01728
GO:0140993 histone modifying activity 3.33% (2/60) 5.51 0.000887 0.019447
GO:0010468 regulation of gene expression 15.0% (9/60) 1.98 0.00042 0.019961
GO:0019219 regulation of nucleobase-containing compound metabolic process 13.33% (8/60) 1.91 0.0012 0.020118
GO:0051252 regulation of RNA metabolic process 13.33% (8/60) 1.92 0.001145 0.02039
GO:0050794 regulation of cellular process 16.67% (10/60) 1.63 0.001299 0.020574
GO:0006355 regulation of DNA-templated transcription 13.33% (8/60) 1.93 0.001097 0.020836
GO:2001141 regulation of RNA biosynthetic process 13.33% (8/60) 1.93 0.001097 0.020836
GO:0016514 SWI/SNF complex 1.67% (1/60) 9.32 0.001565 0.021242
GO:0030289 protein phosphatase 4 complex 1.67% (1/60) 9.32 0.001565 0.021242
GO:0035060 brahma complex 1.67% (1/60) 9.32 0.001565 0.021242
GO:0080090 regulation of primary metabolic process 13.33% (8/60) 1.82 0.001801 0.021386
GO:0005515 protein binding 25.0% (15/60) 1.19 0.001656 0.021452
GO:0051171 regulation of nitrogen compound metabolic process 13.33% (8/60) 1.83 0.00177 0.021932
GO:0050789 regulation of biological process 16.67% (10/60) 1.54 0.00203 0.023144
GO:0065007 biological regulation 16.67% (10/60) 1.5 0.002441 0.026755
GO:0010496 intercellular transport 1.67% (1/60) 8.32 0.003128 0.031838
GO:0010497 plasmodesmata-mediated intercellular transport 1.67% (1/60) 8.32 0.003128 0.031838
GO:0097159 organic cyclic compound binding 31.67% (19/60) 0.92 0.003368 0.033099
GO:0016570 histone modification 3.33% (2/60) 4.44 0.003892 0.036975
GO:0005834 heterotrimeric G-protein complex 1.67% (1/60) 7.73 0.004688 0.038177
GO:1905360 GTPase complex 1.67% (1/60) 7.73 0.004688 0.038177
GO:0001664 G protein-coupled receptor binding 1.67% (1/60) 7.73 0.004688 0.038177
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway 1.67% (1/60) 7.73 0.004688 0.038177
GO:0003712 transcription coregulator activity 3.33% (2/60) 4.37 0.004289 0.039428
GO:0006338 chromatin remodeling 3.33% (2/60) 4.19 0.005433 0.043014
GO:0004713 protein tyrosine kinase activity 3.33% (2/60) 4.13 0.005895 0.045406
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (60) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms