Coexpression cluster: Cluster_92 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005488 binding 53.89% (90/167) 0.89 0.0 0.0
GO:0005515 protein binding 28.14% (47/167) 1.36 0.0 0.0
GO:0003674 molecular_function 67.07% (112/167) 0.55 0.0 3e-06
GO:0015748 organophosphate ester transport 2.4% (4/167) 5.2 4e-06 0.000477
GO:0003682 chromatin binding 2.4% (4/167) 4.89 1e-05 0.000516
GO:0110154 RNA decapping 1.8% (3/167) 6.11 1e-05 0.000555
GO:0140326 ATPase-coupled intramembrane lipid transporter activity 1.8% (3/167) 6.11 1e-05 0.000555
GO:0110156 methylguanosine-cap decapping 1.8% (3/167) 6.11 1e-05 0.000555
GO:0140303 intramembrane lipid transporter activity 1.8% (3/167) 5.97 1.3e-05 0.000609
GO:0003712 transcription coregulator activity 2.99% (5/167) 4.21 8e-06 0.000729
GO:0015914 phospholipid transport 1.8% (3/167) 5.84 1.7e-05 0.000735
GO:0043687 post-translational protein modification 5.39% (9/167) 2.48 4e-05 0.001535
GO:0005319 lipid transporter activity 1.8% (3/167) 5.18 7.5e-05 0.00268
GO:0016570 histone modification 2.4% (4/167) 3.96 0.000131 0.004367
GO:0000123 histone acetyltransferase complex 1.8% (3/167) 4.78 0.000174 0.005069
GO:0032991 protein-containing complex 8.98% (15/167) 1.58 0.000166 0.005172
GO:0003714 transcription corepressor activity 1.8% (3/167) 4.73 0.000196 0.005376
GO:0140993 histone modifying activity 1.8% (3/167) 4.62 0.000246 0.005721
GO:1902493 acetyltransferase complex 1.8% (3/167) 4.62 0.000246 0.005721
GO:0031248 protein acetyltransferase complex 1.8% (3/167) 4.62 0.000246 0.005721
GO:0140657 ATP-dependent activity 5.39% (9/167) 2.1 0.000279 0.006189
GO:0006475 internal protein amino acid acetylation 1.2% (2/167) 5.84 0.000519 0.008065
GO:0043631 obsolete RNA polyadenylation 1.2% (2/167) 5.84 0.000519 0.008065
GO:0000290 deadenylation-dependent decapping of nuclear-transcribed mRNA 1.2% (2/167) 5.84 0.000519 0.008065
GO:0018394 peptidyl-lysine acetylation 1.2% (2/167) 5.84 0.000519 0.008065
GO:0016573 histone acetylation 1.2% (2/167) 5.84 0.000519 0.008065
GO:0004652 obsolete polynucleotide adenylyltransferase activity 1.2% (2/167) 5.84 0.000519 0.008065
GO:0018393 internal peptidyl-lysine acetylation 1.2% (2/167) 5.84 0.000519 0.008065
GO:0016755 aminoacyltransferase activity 3.59% (6/167) 2.58 0.000539 0.008098
GO:0004842 ubiquitin-protein transferase activity 3.59% (6/167) 2.64 0.000437 0.009248
GO:0019787 ubiquitin-like protein transferase activity 3.59% (6/167) 2.61 0.000491 0.009953
GO:0061733 peptide-lysine-N-acetyltransferase activity 1.2% (2/167) 5.52 0.00083 0.011371
GO:0004402 histone acetyltransferase activity 1.2% (2/167) 5.52 0.00083 0.011371
GO:0140640 catalytic activity, acting on a nucleic acid 5.39% (9/167) 1.89 0.000788 0.011474
GO:0140658 ATP-dependent chromatin remodeler activity 1.8% (3/167) 4.0 0.000882 0.011739
GO:0006473 protein acetylation 1.2% (2/167) 5.38 0.001011 0.013089
GO:0031323 regulation of cellular metabolic process 9.58% (16/167) 1.27 0.001085 0.013667
GO:0060255 regulation of macromolecule metabolic process 9.58% (16/167) 1.26 0.001115 0.013673
GO:0043543 protein acylation 1.2% (2/167) 5.26 0.00121 0.014457
GO:0019222 regulation of metabolic process 9.58% (16/167) 1.25 0.00125 0.014557
GO:0044877 protein-containing complex binding 2.4% (4/167) 3.05 0.001449 0.015341
GO:0070461 SAGA-type complex 1.2% (2/167) 5.14 0.001426 0.015452
GO:0034212 peptide N-acetyltransferase activity 1.2% (2/167) 5.14 0.001426 0.015452
GO:0016459 myosin complex 1.2% (2/167) 5.14 0.001426 0.015452
GO:0016887 ATP hydrolysis activity 3.59% (6/167) 2.22 0.001932 0.016672
GO:0031326 regulation of cellular biosynthetic process 8.98% (15/167) 1.23 0.001927 0.016945
GO:0009889 regulation of biosynthetic process 8.98% (15/167) 1.23 0.001927 0.016945
GO:0008150 biological_process 41.32% (69/167) 0.44 0.002032 0.017217
GO:0032940 secretion by cell 1.8% (3/167) 3.67 0.001711 0.017334
GO:0000145 exocyst 1.8% (3/167) 3.67 0.001711 0.017334
GO:0050794 regulation of cellular process 11.38% (19/167) 1.08 0.001754 0.017392
GO:0009742 brassinosteroid mediated signaling pathway 1.2% (2/167) 4.94 0.001908 0.017437
GO:0043401 steroid hormone mediated signaling pathway 1.2% (2/167) 4.94 0.001908 0.017437
GO:0010556 regulation of macromolecule biosynthetic process 8.98% (15/167) 1.24 0.001902 0.018089
GO:0010468 regulation of gene expression 8.98% (15/167) 1.24 0.001877 0.018225
GO:0046903 secretion 1.8% (3/167) 3.54 0.002207 0.018367
GO:0006869 lipid transport 1.8% (3/167) 3.36 0.003171 0.025924
GO:0022406 membrane docking 0.6% (1/167) 7.84 0.004356 0.026712
GO:0035592 establishment of protein localization to extracellular region 0.6% (1/167) 7.84 0.004356 0.026712
GO:0071692 protein localization to extracellular region 0.6% (1/167) 7.84 0.004356 0.026712
GO:0048278 vesicle docking 0.6% (1/167) 7.84 0.004356 0.026712
GO:0006904 vesicle docking involved in exocytosis 0.6% (1/167) 7.84 0.004356 0.026712
GO:0140056 organelle localization by membrane tethering 0.6% (1/167) 7.84 0.004356 0.026712
GO:0009306 protein secretion 0.6% (1/167) 7.84 0.004356 0.026712
GO:0043048 dolichyl monophosphate biosynthetic process 0.6% (1/167) 7.84 0.004356 0.026712
GO:0061780 mitotic cohesin loading 0.6% (1/167) 7.84 0.004356 0.026712
GO:0034502 protein localization to chromosome 0.6% (1/167) 7.84 0.004356 0.026712
GO:0071168 protein localization to chromatin 0.6% (1/167) 7.84 0.004356 0.026712
GO:0004168 dolichol kinase activity 0.6% (1/167) 7.84 0.004356 0.026712
GO:0071921 cohesin loading 0.6% (1/167) 7.84 0.004356 0.026712
GO:0099023 vesicle tethering complex 1.8% (3/167) 3.32 0.003446 0.026765
GO:0050789 regulation of biological process 11.38% (19/167) 0.99 0.003412 0.026947
GO:0065007 biological regulation 11.38% (19/167) 0.95 0.00447 0.02705
GO:0000956 nuclear-transcribed mRNA catabolic process 1.2% (2/167) 4.52 0.003404 0.027351
GO:0061919 process utilizing autophagic mechanism 1.2% (2/167) 4.45 0.003752 0.027752
GO:0006914 autophagy 1.2% (2/167) 4.45 0.003752 0.027752
GO:1990234 transferase complex 2.4% (4/167) 2.67 0.00372 0.028415
GO:0031123 RNA 3'-end processing 1.2% (2/167) 4.2 0.005299 0.031658
GO:0016746 acyltransferase activity 4.79% (8/167) 1.59 0.005487 0.032369
GO:0016043 cellular component organization 4.79% (8/167) 1.58 0.005701 0.033206
GO:0003676 nucleic acid binding 12.57% (21/167) 0.86 0.005805 0.033397
GO:0016592 mediator complex 1.2% (2/167) 4.04 0.00662 0.03762
GO:0006402 mRNA catabolic process 1.2% (2/167) 3.98 0.00709 0.039807
GO:0008094 ATP-dependent activity, acting on DNA 1.8% (3/167) 2.94 0.00723 0.040111
GO:0016070 RNA metabolic process 5.39% (9/167) 1.39 0.007806 0.042795
GO:0005524 ATP binding 11.38% (19/167) 0.87 0.0079 0.042807
GO:0031087 deadenylation-independent decapping of nuclear-transcribed mRNA 0.6% (1/167) 6.84 0.008694 0.044521
GO:0006901 vesicle coating 0.6% (1/167) 6.84 0.008694 0.044521
GO:0031499 TRAMP complex 0.6% (1/167) 6.84 0.008694 0.044521
GO:0048208 COPII vesicle coating 0.6% (1/167) 6.84 0.008694 0.044521
GO:0044599 AP-5 adaptor complex 0.6% (1/167) 6.84 0.008694 0.044521
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (167) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms