Coexpression cluster: Cluster_9 (Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0042743 hydrogen peroxide metabolic process 3.29% (5/152) 3.05 0.000363 0.015657
GO:0042744 hydrogen peroxide catabolic process 3.29% (5/152) 3.05 0.000363 0.015657
GO:0019205 nucleobase-containing compound kinase activity 1.97% (3/152) 4.48 0.000334 0.017013
GO:0042726 flavin-containing compound metabolic process 1.32% (2/152) 5.81 0.000552 0.017177
GO:0042727 flavin-containing compound biosynthetic process 1.32% (2/152) 5.81 0.000552 0.017177
GO:0006771 riboflavin metabolic process 1.32% (2/152) 5.81 0.000552 0.017177
GO:0009231 riboflavin biosynthetic process 1.32% (2/152) 5.81 0.000552 0.017177
GO:0009208 pyrimidine ribonucleoside triphosphate metabolic process 1.32% (2/152) 5.52 0.000839 0.017404
GO:0009209 pyrimidine ribonucleoside triphosphate biosynthetic process 1.32% (2/152) 5.52 0.000839 0.017404
GO:0046036 CTP metabolic process 1.32% (2/152) 5.52 0.000839 0.017404
GO:0016872 intramolecular lyase activity 1.32% (2/152) 5.52 0.000839 0.017404
GO:0009148 pyrimidine nucleoside triphosphate biosynthetic process 1.32% (2/152) 5.52 0.000839 0.017404
GO:0006241 CTP biosynthetic process 1.32% (2/152) 5.52 0.000839 0.017404
GO:0046039 GTP metabolic process 1.32% (2/152) 6.17 0.000324 0.01813
GO:0006228 UTP biosynthetic process 1.32% (2/152) 6.17 0.000324 0.01813
GO:0006183 GTP biosynthetic process 1.32% (2/152) 6.17 0.000324 0.01813
GO:0046051 UTP metabolic process 1.32% (2/152) 6.17 0.000324 0.01813
GO:0004550 nucleoside diphosphate kinase activity 1.32% (2/152) 6.17 0.000324 0.01813
GO:0006165 obsolete nucleoside diphosphate phosphorylation 1.32% (2/152) 6.17 0.000324 0.01813
GO:0044281 small molecule metabolic process 7.24% (11/152) 1.7 0.000622 0.018345
GO:0004601 peroxidase activity 3.29% (5/152) 2.71 0.001069 0.018705
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor 3.29% (5/152) 2.71 0.001069 0.018705
GO:0009147 pyrimidine nucleoside triphosphate metabolic process 1.32% (2/152) 5.39 0.001004 0.018748
GO:0004536 DNA nuclease activity 1.32% (2/152) 5.39 0.001004 0.018748
GO:0016788 hydrolase activity, acting on ester bonds 6.58% (10/152) 1.7 0.001113 0.018895
GO:0009218 pyrimidine ribonucleotide metabolic process 1.32% (2/152) 5.28 0.001184 0.018942
GO:0009220 pyrimidine ribonucleotide biosynthetic process 1.32% (2/152) 5.28 0.001184 0.018942
GO:0006979 response to oxidative stress 3.29% (5/152) 2.75 0.000951 0.019019
GO:0016791 phosphatase activity 3.95% (6/152) 2.51 0.000703 0.019674
GO:0140299 small molecule sensor activity 1.32% (2/152) 5.17 0.001378 0.01978
GO:0004673 protein histidine kinase activity 1.32% (2/152) 5.17 0.001378 0.01978
GO:0000155 phosphorelay sensor kinase activity 1.32% (2/152) 5.17 0.001378 0.01978
GO:0016775 phosphotransferase activity, nitrogenous group as acceptor 1.32% (2/152) 5.17 0.001378 0.01978
GO:0072593 reactive oxygen species metabolic process 3.29% (5/152) 2.94 0.000514 0.020566
GO:0044283 small molecule biosynthetic process 3.95% (6/152) 2.48 0.000774 0.020639
GO:0016209 antioxidant activity 3.29% (5/152) 2.56 0.001685 0.023595
GO:0017004 cytochrome complex assembly 1.32% (2/152) 4.98 0.001807 0.024683
GO:0003824 catalytic activity 37.5% (57/152) 0.68 6.6e-05 0.036909
GO:0016776 phosphotransferase activity, phosphate group as acceptor 1.97% (3/152) 4.56 0.000279 0.039005
GO:0009987 cellular process 30.92% (47/152) 0.74 0.000144 0.040351
GO:0009349 riboflavin synthase complex 0.66% (1/152) 7.98 0.003965 0.047244
GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity 0.66% (1/152) 7.98 0.003965 0.047244
GO:0004747 ribokinase activity 0.66% (1/152) 7.98 0.003965 0.047244
GO:0010190 cytochrome b6f complex assembly 0.66% (1/152) 7.98 0.003965 0.047244
GO:0006014 D-ribose metabolic process 0.66% (1/152) 7.98 0.003965 0.047244
GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity 0.66% (1/152) 7.98 0.003965 0.047244
GO:0042578 phosphoric ester hydrolase activity 4.61% (7/152) 2.5 0.000256 0.047868
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (152) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms