Coexpression cluster: Cluster_400 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0046527 glucosyltransferase activity 33.33% (1/3) 6.95 0.008039 0.021438
GO:0009893 positive regulation of metabolic process 33.33% (1/3) 6.95 0.008039 0.021438
GO:0051173 positive regulation of nitrogen compound metabolic process 33.33% (1/3) 6.97 0.007961 0.022747
GO:0010604 positive regulation of macromolecule metabolic process 33.33% (1/3) 6.97 0.007961 0.022747
GO:0006357 regulation of transcription by RNA polymerase II 33.33% (1/3) 6.76 0.009206 0.023759
GO:0016051 carbohydrate biosynthetic process 33.33% (1/3) 7.01 0.007728 0.023778
GO:0048522 positive regulation of cellular process 33.33% (1/3) 7.01 0.007728 0.023778
GO:0031328 positive regulation of cellular biosynthetic process 33.33% (1/3) 7.23 0.006637 0.024136
GO:0010557 positive regulation of macromolecule biosynthetic process 33.33% (1/3) 7.23 0.006637 0.024136
GO:0009891 positive regulation of biosynthetic process 33.33% (1/3) 7.23 0.006637 0.024136
GO:0005976 polysaccharide metabolic process 33.33% (1/3) 6.68 0.009751 0.024377
GO:0031325 positive regulation of cellular metabolic process 33.33% (1/3) 7.09 0.007339 0.024462
GO:0044042 glucan metabolic process 33.33% (1/3) 7.12 0.007183 0.024984
GO:0048518 positive regulation of biological process 33.33% (1/3) 6.54 0.010684 0.025899
GO:0003690 double-stranded DNA binding 33.33% (1/3) 6.45 0.011383 0.026783
GO:0045935 positive regulation of nucleobase-containing compound metabolic process 33.33% (1/3) 7.28 0.006404 0.026963
GO:0045893 positive regulation of DNA-templated transcription 33.33% (1/3) 7.3 0.006326 0.028115
GO:0051254 positive regulation of RNA metabolic process 33.33% (1/3) 7.3 0.006326 0.028115
GO:1902680 positive regulation of RNA biosynthetic process 33.33% (1/3) 7.3 0.006326 0.028115
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific 33.33% (1/3) 7.49 0.005546 0.02958
GO:1990837 sequence-specific double-stranded DNA binding 33.33% (1/3) 7.51 0.005468 0.031248
GO:0000976 transcription cis-regulatory region binding 33.33% (1/3) 7.55 0.005312 0.032691
GO:0001067 transcription regulatory region nucleic acid binding 33.33% (1/3) 7.55 0.005312 0.032691
GO:0000271 polysaccharide biosynthetic process 33.33% (1/3) 7.6 0.005156 0.037501
GO:0035251 UDP-glucosyltransferase activity 33.33% (1/3) 7.62 0.005078 0.040627
GO:0045944 positive regulation of transcription by RNA polymerase II 33.33% (1/3) 7.73 0.004688 0.041674
GO:0051273 beta-glucan metabolic process 33.33% (1/3) 8.09 0.003674 0.041986
GO:0016758 hexosyltransferase activity 33.33% (1/3) 5.7 0.019052 0.043547
GO:0030243 cellulose metabolic process 33.33% (1/3) 8.47 0.002815 0.045036
GO:0009250 glucan biosynthetic process 33.33% (1/3) 7.78 0.004532 0.045323
GO:0051274 beta-glucan biosynthetic process 33.33% (1/3) 8.12 0.003596 0.047943
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (3) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms