Coexpression cluster: Cluster_118 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0005986 sucrose biosynthetic process 4.4% (4/91) 7.72 0.0 1e-06
GO:0005985 sucrose metabolic process 4.4% (4/91) 7.02 0.0 5e-06
GO:0046524 sucrose-phosphate synthase activity 3.3% (3/91) 7.98 0.0 2e-05
GO:0009312 oligosaccharide biosynthetic process 4.4% (4/91) 5.86 1e-06 6.1e-05
GO:0046351 disaccharide biosynthetic process 4.4% (4/91) 5.91 1e-06 6.6e-05
GO:0005984 disaccharide metabolic process 4.4% (4/91) 5.63 1e-06 9.9e-05
GO:0009311 oligosaccharide metabolic process 4.4% (4/91) 5.55 2e-06 0.000108
GO:0006544 glycine metabolic process 3.3% (3/91) 6.72 3e-06 0.00016
GO:0016051 carbohydrate biosynthetic process 5.49% (5/91) 4.41 4e-06 0.000205
GO:0009071 serine family amino acid catabolic process 2.2% (2/91) 7.13 8.3e-05 0.002914
GO:0006546 glycine catabolic process 2.2% (2/91) 7.13 8.3e-05 0.002914
GO:0009523 photosystem II 3.3% (3/91) 5.09 9.5e-05 0.003089
GO:0035091 phosphatidylinositol binding 3.3% (3/91) 5.17 8e-05 0.003323
GO:0009069 serine family amino acid metabolic process 3.3% (3/91) 5.17 8e-05 0.003323
GO:0050308 sugar-phosphatase activity 2.2% (2/91) 6.91 0.000116 0.003531
GO:0008194 UDP-glycosyltransferase activity 6.59% (6/91) 2.91 0.000155 0.004406
GO:0009521 photosystem 3.3% (3/91) 4.72 0.000207 0.005248
GO:0016157 sucrose synthase activity 2.2% (2/91) 6.55 0.000198 0.005324
GO:0005975 carbohydrate metabolic process 8.79% (8/91) 2.29 0.00024 0.005754
GO:0015979 photosynthesis 3.3% (3/91) 4.6 0.000263 0.005994
GO:0016758 hexosyltransferase activity 5.49% (5/91) 3.1 0.000304 0.006609
GO:1990204 oxidoreductase complex 3.3% (3/91) 4.5 0.000327 0.006788
GO:0003674 molecular_function 63.74% (58/91) 0.48 0.000392 0.007778
GO:0005543 phospholipid binding 3.3% (3/91) 4.33 0.000464 0.008807
GO:0035251 UDP-glucosyltransferase activity 3.3% (3/91) 4.28 0.000508 0.009268
GO:0016742 hydroxymethyl-, formyl- and related transferase activity 2.2% (2/91) 5.81 0.000574 0.010059
GO:1901565 organonitrogen compound catabolic process 4.4% (4/91) 3.36 0.000646 0.010913
GO:0009058 biosynthetic process 12.09% (11/91) 1.62 0.000896 0.014588
GO:0019898 extrinsic component of membrane 2.2% (2/91) 5.47 0.000928 0.014597
GO:0016757 glycosyltransferase activity 7.69% (7/91) 2.17 0.000974 0.014801
GO:0019203 carbohydrate phosphatase activity 2.2% (2/91) 5.33 0.001137 0.016718
GO:0009654 photosystem II oxygen evolving complex 2.2% (2/91) 5.19 0.001365 0.019452
GO:1901606 alpha-amino acid catabolic process 2.2% (2/91) 5.02 0.001745 0.023409
GO:1901576 organic substance biosynthetic process 10.99% (10/91) 1.6 0.001697 0.023456
GO:0046527 glucosyltransferase activity 3.3% (3/91) 3.62 0.001928 0.02376
GO:0009063 amino acid catabolic process 2.2% (2/91) 4.96 0.001882 0.02384
GO:0005488 binding 43.96% (40/91) 0.59 0.001855 0.024173
GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway 1.1% (1/91) 8.72 0.002374 0.027756
GO:0004047 aminomethyltransferase activity 1.1% (1/91) 8.72 0.002374 0.027756
GO:0016740 transferase activity 19.78% (18/91) 1.03 0.002596 0.029593
GO:0016054 organic acid catabolic process 2.2% (2/91) 4.4 0.0041 0.04451
GO:0046395 carboxylic acid catabolic process 2.2% (2/91) 4.4 0.0041 0.04451
GO:0010343 singlet oxygen-mediated programmed cell death 1.1% (1/91) 7.72 0.004742 0.046009
GO:0004516 nicotinate phosphoribosyltransferase activity 1.1% (1/91) 7.72 0.004742 0.046009
GO:0097468 programmed cell death in response to reactive oxygen species 1.1% (1/91) 7.72 0.004742 0.046009
GO:0043546 molybdopterin cofactor binding 1.1% (1/91) 7.72 0.004742 0.046009
GO:1901605 alpha-amino acid metabolic process 3.3% (3/91) 3.1 0.005246 0.049835
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (91) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms