Coexpression cluster: Cluster_478 (Co-expression clusters of Perlo et al 2022 (PRJEB44480))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0031379 RNA-directed RNA polymerase complex 2.6% (4/154) 6.56 0.0 1.4e-05
GO:0031380 nuclear RNA-directed RNA polymerase complex 2.6% (4/154) 6.56 0.0 1.4e-05
GO:0003968 RNA-dependent RNA polymerase activity 2.6% (4/154) 6.32 0.0 1.8e-05
GO:0030422 siRNA processing 2.6% (4/154) 5.25 4e-06 0.000249
GO:0009664 plant-type cell wall organization 1.95% (3/154) 6.2 1.1e-05 0.000478
GO:0070918 regulatory ncRNA processing 2.6% (4/154) 4.64 2.4e-05 0.000889
GO:0034062 5'-3' RNA polymerase activity 2.6% (4/154) 4.01 0.000124 0.003517
GO:0097747 RNA polymerase activity 2.6% (4/154) 4.01 0.000124 0.003517
GO:0030880 RNA polymerase complex 2.6% (4/154) 3.94 0.000151 0.003803
GO:0009607 response to biotic stimulus 7.14% (11/154) 1.84 0.000297 0.004817
GO:0044419 biological process involved in interspecies interaction between organisms 7.14% (11/154) 1.84 0.000292 0.005101
GO:0043207 response to external biotic stimulus 7.14% (11/154) 1.84 0.00029 0.005487
GO:0043531 ADP binding 5.84% (9/154) 2.05 0.000378 0.005719
GO:0051707 response to other organism 7.14% (11/154) 1.84 0.00029 0.005982
GO:0098542 defense response to other organism 7.14% (11/154) 1.84 0.00029 0.005982
GO:0008270 zinc ion binding 5.19% (8/154) 2.17 0.000456 0.00609
GO:0009605 response to external stimulus 7.14% (11/154) 1.75 0.000496 0.006253
GO:0006952 defense response 7.14% (11/154) 1.76 0.000454 0.006448
GO:0071555 cell wall organization 1.95% (3/154) 4.2 0.000628 0.007505
GO:0045229 external encapsulating structure organization 1.95% (3/154) 3.97 0.001001 0.011359
GO:0004650 polygalacturonase activity 1.3% (2/154) 4.65 0.002967 0.029286
GO:0036297 interstrand cross-link repair 1.3% (2/154) 4.68 0.002856 0.029471
GO:0061695 transferase complex, transferring phosphorus-containing groups 2.6% (4/154) 2.81 0.002738 0.029592
GO:0071669 plant-type cell wall organization or biogenesis 1.95% (3/154) 3.32 0.003582 0.033884
GO:0006950 response to stress 8.44% (13/154) 1.23 0.003855 0.035003
GO:0051645 Golgi localization 0.65% (1/154) 7.84 0.004348 0.036553
GO:0016779 nucleotidyltransferase activity 2.6% (4/154) 2.63 0.00422 0.03684
GO:0005576 extracellular region 1.95% (3/154) 3.08 0.005631 0.045655
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (154) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms