Coexpression cluster: Cluster_108 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0009199 ribonucleoside triphosphate metabolic process 4.44% (8/180) 4.2 0.0 2e-06
GO:0009141 nucleoside triphosphate metabolic process 4.44% (8/180) 4.12 0.0 2e-06
GO:0019693 ribose phosphate metabolic process 5.0% (9/180) 3.75 0.0 2e-06
GO:0009259 ribonucleotide metabolic process 5.0% (9/180) 3.8 0.0 2e-06
GO:0009150 purine ribonucleotide metabolic process 5.0% (9/180) 3.86 0.0 3e-06
GO:0009205 purine ribonucleoside triphosphate metabolic process 4.44% (8/180) 4.26 0.0 3e-06
GO:0009144 purine nucleoside triphosphate metabolic process 4.44% (8/180) 4.26 0.0 3e-06
GO:1901135 carbohydrate derivative metabolic process 6.11% (11/180) 3.13 0.0 5e-06
GO:0046034 ATP metabolic process 3.89% (7/180) 4.18 0.0 8e-06
GO:0006163 purine nucleotide metabolic process 5.0% (9/180) 3.5 0.0 8e-06
GO:0072521 purine-containing compound metabolic process 5.0% (9/180) 3.42 0.0 1.1e-05
GO:0009117 nucleotide metabolic process 5.0% (9/180) 3.25 1e-06 2.7e-05
GO:0006753 nucleoside phosphate metabolic process 5.0% (9/180) 3.22 1e-06 2.9e-05
GO:0055086 nucleobase-containing small molecule metabolic process 5.0% (9/180) 2.95 3e-06 0.000126
GO:0009145 purine nucleoside triphosphate biosynthetic process 2.22% (4/180) 4.83 1.2e-05 0.000441
GO:0009206 purine ribonucleoside triphosphate biosynthetic process 2.22% (4/180) 4.83 1.2e-05 0.000441
GO:0019637 organophosphate metabolic process 5.56% (10/180) 2.47 1.5e-05 0.000541
GO:0009201 ribonucleoside triphosphate biosynthetic process 2.22% (4/180) 4.65 2e-05 0.000619
GO:0009142 nucleoside triphosphate biosynthetic process 2.22% (4/180) 4.65 2e-05 0.000619
GO:1901137 carbohydrate derivative biosynthetic process 3.33% (6/180) 3.34 3e-05 0.000917
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism 1.67% (3/180) 5.41 4.4e-05 0.001216
GO:0015252 proton channel activity 1.67% (3/180) 5.41 4.4e-05 0.001216
GO:0016052 carbohydrate catabolic process 2.78% (5/180) 3.61 5.8e-05 0.001529
GO:0015078 proton transmembrane transporter activity 2.78% (5/180) 3.58 6.5e-05 0.001634
GO:0072524 pyridine-containing compound metabolic process 2.78% (5/180) 3.56 6.9e-05 0.001654
GO:0015318 inorganic molecular entity transmembrane transporter activity 4.44% (8/180) 2.54 7.8e-05 0.001797
GO:0009134 nucleoside diphosphate catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0006195 purine nucleotide catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0006096 glycolytic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0009137 purine nucleoside diphosphate catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0072526 pyridine-containing compound catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0009191 ribonucleoside diphosphate catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0072523 purine-containing compound catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0009135 purine nucleoside diphosphate metabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0046032 ADP catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0009185 ribonucleoside diphosphate metabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0019364 pyridine nucleotide catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0009181 purine ribonucleoside diphosphate catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0009179 purine ribonucleoside diphosphate metabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0009154 purine ribonucleotide catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0046031 ADP metabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0009261 ribonucleotide catabolic process 2.22% (4/180) 3.95 0.000133 0.001906
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain 1.67% (3/180) 4.86 0.000147 0.002055
GO:0009166 nucleotide catabolic process 2.22% (4/180) 3.9 0.000153 0.002092
GO:0015986 proton motive force-driven ATP synthesis 1.67% (3/180) 4.8 0.000168 0.00211
GO:0006754 ATP biosynthetic process 1.67% (3/180) 4.8 0.000168 0.00211
GO:0009152 purine ribonucleotide biosynthetic process 2.22% (4/180) 3.88 0.000164 0.002142
GO:0009132 nucleoside diphosphate metabolic process 2.22% (4/180) 3.88 0.000164 0.002142
GO:1901292 nucleoside phosphate catabolic process 2.22% (4/180) 3.8 0.000199 0.002446
GO:0044281 small molecule metabolic process 7.22% (13/180) 1.7 0.000211 0.00254
GO:0046390 ribose phosphate biosynthetic process 2.22% (4/180) 3.73 0.00024 0.002776
GO:0009260 ribonucleotide biosynthetic process 2.22% (4/180) 3.73 0.00024 0.002776
GO:0003674 molecular_function 58.89% (106/180) 0.37 0.000245 0.00278
GO:0046434 organophosphate catabolic process 2.22% (4/180) 3.69 0.00027 0.00301
GO:0006090 pyruvate metabolic process 2.22% (4/180) 3.58 0.000357 0.003912
GO:0006164 purine nucleotide biosynthetic process 2.22% (4/180) 3.47 0.000487 0.005235
GO:0003824 catalytic activity 34.44% (62/180) 0.56 0.000507 0.005352
GO:0046496 nicotinamide nucleotide metabolic process 2.22% (4/180) 3.38 0.000618 0.006415
GO:0019362 pyridine nucleotide metabolic process 2.22% (4/180) 3.34 0.000677 0.006907
GO:0072522 purine-containing compound biosynthetic process 2.22% (4/180) 3.31 0.00074 0.007299
GO:1901136 carbohydrate derivative catabolic process 2.22% (4/180) 3.31 0.00074 0.007299
GO:1901576 organic substance biosynthetic process 8.89% (16/180) 1.29 0.000906 0.008795
GO:0006091 generation of precursor metabolites and energy 2.78% (5/180) 2.73 0.001013 0.009678
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) 1.11% (2/180) 5.28 0.001173 0.011032
GO:0004743 pyruvate kinase activity 1.11% (2/180) 5.15 0.001403 0.012606
GO:0031420 alkali metal ion binding 1.11% (2/180) 5.15 0.001403 0.012606
GO:0030955 potassium ion binding 1.11% (2/180) 5.15 0.001403 0.012606
GO:0015698 inorganic anion transport 1.67% (3/180) 3.73 0.001508 0.013347
GO:0009165 nucleotide biosynthetic process 2.22% (4/180) 2.97 0.001782 0.015327
GO:1901293 nucleoside phosphate biosynthetic process 2.22% (4/180) 2.97 0.001782 0.015327
GO:0034655 nucleobase-containing compound catabolic process 2.22% (4/180) 2.95 0.001843 0.015624
GO:0005216 monoatomic ion channel activity 2.22% (4/180) 2.94 0.001905 0.015926
GO:0005261 monoatomic cation channel activity 1.67% (3/180) 3.59 0.002007 0.016552
GO:0009058 biosynthetic process 8.89% (16/180) 1.18 0.00211 0.017166
GO:0003924 GTPase activity 2.78% (5/180) 2.47 0.002197 0.017635
GO:0032787 monocarboxylic acid metabolic process 2.78% (5/180) 2.43 0.002455 0.019197
GO:0090407 organophosphate biosynthetic process 2.78% (5/180) 2.43 0.002455 0.019197
GO:0044270 cellular nitrogen compound catabolic process 2.22% (4/180) 2.83 0.002529 0.019517
GO:0046700 heterocycle catabolic process 2.22% (4/180) 2.82 0.002606 0.019856
GO:0006006 glucose metabolic process 1.11% (2/180) 4.49 0.003557 0.02677
GO:0055085 transmembrane transport 6.11% (11/180) 1.38 0.003652 0.027144
GO:0005992 trehalose biosynthetic process 1.11% (2/180) 4.41 0.003941 0.02893
GO:0022890 inorganic cation transmembrane transporter activity 2.78% (5/180) 2.2 0.004831 0.030292
GO:0032561 guanyl ribonucleotide binding 2.78% (5/180) 2.2 0.004831 0.030292
GO:0005525 GTP binding 2.78% (5/180) 2.2 0.004831 0.030292
GO:0006139 nucleobase-containing compound metabolic process 7.78% (14/180) 1.15 0.004719 0.030549
GO:0031332 RNAi effector complex 0.56% (1/180) 7.73 0.004696 0.030725
GO:0016442 RISC complex 0.56% (1/180) 7.73 0.004696 0.030725
GO:0047632 agmatine deiminase activity 0.56% (1/180) 7.73 0.004696 0.030725
GO:0009446 putrescine biosynthetic process 0.56% (1/180) 7.73 0.004696 0.030725
GO:0009445 putrescine metabolic process 0.56% (1/180) 7.73 0.004696 0.030725
GO:0004668 protein-arginine deiminase activity 0.56% (1/180) 7.73 0.004696 0.030725
GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity 0.56% (1/180) 7.73 0.004696 0.030725
GO:0022804 active transmembrane transporter activity 3.33% (6/180) 1.94 0.004983 0.030924
GO:0046483 heterocycle metabolic process 8.33% (15/180) 1.11 0.004387 0.031437
GO:0005991 trehalose metabolic process 1.11% (2/180) 4.34 0.004342 0.031492
GO:0034641 cellular nitrogen compound metabolic process 9.44% (17/180) 1.0 0.005185 0.031851
GO:0015075 monoatomic ion transmembrane transporter activity 3.33% (6/180) 1.97 0.004566 0.032336
GO:0019001 guanyl nucleotide binding 2.78% (5/180) 2.16 0.005567 0.033852
GO:0006725 cellular aromatic compound metabolic process 8.33% (15/180) 1.06 0.005878 0.035383
GO:0022857 transmembrane transporter activity 6.67% (12/180) 1.21 0.006098 0.036344
GO:1901360 organic cyclic compound metabolic process 8.33% (15/180) 1.03 0.007016 0.041411
GO:0015267 channel activity 2.22% (4/180) 2.39 0.007314 0.041536
GO:0022803 passive transmembrane transporter activity 2.22% (4/180) 2.39 0.007314 0.041536
GO:0019439 aromatic compound catabolic process 2.22% (4/180) 2.39 0.007314 0.041536
GO:0005215 transporter activity 6.67% (12/180) 1.18 0.007134 0.041693
GO:0046351 disaccharide biosynthetic process 1.11% (2/180) 3.93 0.007649 0.042246
GO:1901361 organic cyclic compound catabolic process 2.22% (4/180) 2.38 0.00763 0.04253
GO:1901565 organonitrogen compound catabolic process 2.22% (4/180) 2.38 0.00763 0.04253
GO:0006370 7-methylguanosine mRNA capping 0.56% (1/180) 6.73 0.009369 0.042729
GO:0008121 ubiquinol-cytochrome-c reductase activity 0.56% (1/180) 6.73 0.009369 0.042729
GO:0002953 5'-deoxynucleotidase activity 0.56% (1/180) 6.73 0.009369 0.042729
GO:2001006 regulation of cellulose biosynthetic process 0.56% (1/180) 6.73 0.009369 0.042729
GO:0032950 regulation of beta-glucan metabolic process 0.56% (1/180) 6.73 0.009369 0.042729
GO:0051211 anisotropic cell growth 0.56% (1/180) 6.73 0.009369 0.042729
GO:0006109 regulation of carbohydrate metabolic process 0.56% (1/180) 6.73 0.009369 0.042729
GO:0010330 cellulose synthase complex 0.56% (1/180) 6.73 0.009369 0.042729
GO:0010962 regulation of glucan biosynthetic process 0.56% (1/180) 6.73 0.009369 0.042729
GO:0032951 regulation of beta-glucan biosynthetic process 0.56% (1/180) 6.73 0.009369 0.042729
GO:0032881 regulation of polysaccharide metabolic process 0.56% (1/180) 6.73 0.009369 0.042729
GO:0032885 regulation of polysaccharide biosynthetic process 0.56% (1/180) 6.73 0.009369 0.042729
GO:0008174 mRNA methyltransferase activity 0.56% (1/180) 6.73 0.009369 0.042729
GO:0004482 mRNA 5'-cap (guanine-N7-)-methyltransferase activity 0.56% (1/180) 6.73 0.009369 0.042729
GO:0004359 glutaminase activity 0.56% (1/180) 6.73 0.009369 0.042729
GO:0004112 cyclic-nucleotide phosphodiesterase activity 0.56% (1/180) 6.73 0.009369 0.042729
GO:0004347 glucose-6-phosphate isomerase activity 0.56% (1/180) 6.73 0.009369 0.042729
GO:0043255 regulation of carbohydrate biosynthetic process 0.56% (1/180) 6.73 0.009369 0.042729
GO:0090079 translation regulator activity, nucleic acid binding 1.67% (3/180) 2.88 0.008085 0.043849
GO:0008135 translation factor activity, RNA binding 1.67% (3/180) 2.88 0.008085 0.043849
GO:0045182 translation regulator activity 1.67% (3/180) 2.78 0.009698 0.043898
GO:0009312 oligosaccharide biosynthetic process 1.11% (2/180) 3.88 0.008191 0.044024
GO:0016776 phosphotransferase activity, phosphate group as acceptor 1.11% (2/180) 3.73 0.009915 0.044541
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.89% (7/180) 1.61 0.00854 0.045497
GO:0008324 monoatomic cation transmembrane transporter activity 2.78% (5/180) 1.99 0.008902 0.047006
GO:0046467 membrane lipid biosynthetic process 1.11% (2/180) 3.65 0.011145 0.048974
GO:0019205 nucleobase-containing compound kinase activity 1.11% (2/180) 3.65 0.011145 0.048974
GO:0005984 disaccharide metabolic process 1.11% (2/180) 3.65 0.011145 0.048974
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (180) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms