Coexpression cluster: Cluster_472 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0060090 molecular adaptor activity 50.0% (1/2) 9.02 0.001929 0.006891
GO:0030674 protein-macromolecule adaptor activity 50.0% (1/2) 9.1 0.001825 0.00702
GO:0040029 epigenetic regulation of gene expression 50.0% (1/2) 9.1 0.001825 0.00702
GO:0031047 regulatory ncRNA-mediated gene silencing 50.0% (1/2) 9.27 0.001617 0.007349
GO:0005484 SNAP receptor activity 50.0% (1/2) 9.32 0.001565 0.007823
GO:0070828 heterochromatin organization 50.0% (1/2) 9.47 0.001408 0.007823
GO:0045814 negative regulation of gene expression, epigenetic 50.0% (1/2) 9.47 0.001408 0.007823
GO:0031507 heterochromatin formation 50.0% (1/2) 9.47 0.001408 0.007823
GO:0031048 regulatory ncRNA-mediated heterochromatin formation 50.0% (1/2) 9.64 0.001252 0.010431
GO:0006346 DNA methylation-dependent heterochromatin formation 50.0% (1/2) 9.64 0.001252 0.010431
GO:0140718 facultative heterochromatin formation 50.0% (1/2) 9.64 0.001252 0.010431
GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum 50.0% (1/2) 9.64 0.001252 0.010431
GO:0080188 gene silencing by RNA-directed DNA methylation 50.0% (1/2) 9.64 0.001252 0.010431
GO:0048193 Golgi vesicle transport 50.0% (1/2) 8.25 0.003284 0.010948
GO:0006338 chromatin remodeling 50.0% (1/2) 8.1 0.003649 0.011403
GO:0006325 chromatin organization 50.0% (1/2) 7.94 0.004065 0.011957
GO:0010629 negative regulation of gene expression 50.0% (1/2) 7.8 0.004482 0.01245
GO:0071824 protein-DNA complex organization 50.0% (1/2) 7.67 0.004898 0.01289
GO:0031201 SNARE complex 50.0% (1/2) 11.64 0.000313 0.015651
GO:0010558 negative regulation of macromolecule biosynthetic process 50.0% (1/2) 7.16 0.006979 0.015862
GO:0009890 negative regulation of biosynthetic process 50.0% (1/2) 7.16 0.006979 0.015862
GO:0031327 negative regulation of cellular biosynthetic process 50.0% (1/2) 7.16 0.006979 0.015862
GO:0009892 negative regulation of metabolic process 50.0% (1/2) 6.96 0.008019 0.016037
GO:0010605 negative regulation of macromolecule metabolic process 50.0% (1/2) 6.96 0.008019 0.016037
GO:0031324 negative regulation of cellular metabolic process 50.0% (1/2) 6.99 0.007863 0.017093
GO:0048523 negative regulation of cellular process 50.0% (1/2) 6.58 0.010459 0.020114
GO:0048519 negative regulation of biological process 50.0% (1/2) 6.48 0.011134 0.020619
GO:0016192 vesicle-mediated transport 50.0% (1/2) 6.31 0.012586 0.0217
GO:0043933 protein-containing complex organization 50.0% (1/2) 6.33 0.012379 0.022105
GO:0098796 membrane protein complex 50.0% (1/2) 6.23 0.013312 0.022186
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms