Coexpression cluster: Cluster_32 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0045185 maintenance of protein location 2.82% (2/71) 7.75 3.4e-05 0.001791
GO:0046923 ER retention sequence binding 2.82% (2/71) 7.75 3.4e-05 0.001791
GO:0072595 maintenance of protein localization in organelle 2.82% (2/71) 7.75 3.4e-05 0.001791
GO:0051651 maintenance of location in cell 2.82% (2/71) 7.75 3.4e-05 0.001791
GO:0032507 maintenance of protein location in cell 2.82% (2/71) 7.75 3.4e-05 0.001791
GO:0006621 protein retention in ER lumen 2.82% (2/71) 7.75 3.4e-05 0.001791
GO:0035437 maintenance of protein localization in endoplasmic reticulum 2.82% (2/71) 7.75 3.4e-05 0.001791
GO:0042277 peptide binding 2.82% (2/71) 6.91 0.000121 0.003743
GO:0005048 signal sequence binding 2.82% (2/71) 6.91 0.000121 0.003743
GO:0051235 maintenance of location 2.82% (2/71) 6.91 0.000121 0.003743
GO:0016787 hydrolase activity 21.13% (15/71) 1.62 8.2e-05 0.0038
GO:0003743 translation initiation factor activity 4.23% (3/71) 5.05 0.000106 0.004361
GO:0003674 molecular_function 66.2% (47/71) 0.54 0.000388 0.011113
GO:0090079 translation regulator activity, nucleic acid binding 4.23% (3/71) 4.22 0.000577 0.01342
GO:0008135 translation factor activity, RNA binding 4.23% (3/71) 4.22 0.000577 0.01342
GO:0003824 catalytic activity 40.85% (29/71) 0.8 0.000806 0.014993
GO:0006465 signal peptide processing 2.82% (2/71) 5.83 0.000567 0.015058
GO:0045182 translation regulator activity 4.23% (3/71) 4.12 0.000701 0.015341
GO:0016311 dephosphorylation 4.23% (3/71) 4.06 0.000792 0.015514
GO:0033218 amide binding 2.82% (2/71) 5.62 0.000763 0.015764
GO:0006413 translational initiation 2.82% (2/71) 5.49 0.000909 0.016105
GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen 1.41% (1/71) 9.08 0.001852 0.018621
GO:0043289 apocarotenoid biosynthetic process 1.41% (1/71) 9.08 0.001852 0.018621
GO:0043288 apocarotenoid metabolic process 1.41% (1/71) 9.08 0.001852 0.018621
GO:0071484 cellular response to light intensity 1.41% (1/71) 9.08 0.001852 0.018621
GO:0003934 GTP cyclohydrolase I activity 1.41% (1/71) 9.08 0.001852 0.018621
GO:0052662 zeaxanthin epoxidase activity 1.41% (1/71) 9.08 0.001852 0.018621
GO:0120254 olefinic compound metabolic process 1.41% (1/71) 9.08 0.001852 0.018621
GO:0120255 olefinic compound biosynthetic process 1.41% (1/71) 9.08 0.001852 0.018621
GO:1902644 tertiary alcohol metabolic process 1.41% (1/71) 9.08 0.001852 0.018621
GO:1902645 tertiary alcohol biosynthetic process 1.41% (1/71) 9.08 0.001852 0.018621
GO:0071486 cellular response to high light intensity 1.41% (1/71) 9.08 0.001852 0.018621
GO:0009687 abscisic acid metabolic process 1.41% (1/71) 9.08 0.001852 0.018621
GO:0009688 abscisic acid biosynthetic process 1.41% (1/71) 9.08 0.001852 0.018621
GO:0001731 formation of translation preinitiation complex 1.41% (1/71) 9.08 0.001852 0.018621
GO:0016485 protein processing 2.82% (2/71) 4.95 0.001934 0.018937
GO:0004252 serine-type endopeptidase activity 4.23% (3/71) 3.58 0.00205 0.019549
GO:0022618 protein-RNA complex assembly 2.82% (2/71) 5.27 0.001239 0.020954
GO:0004416 hydroxyacylglutathione hydrolase activity 1.41% (1/71) 8.08 0.003701 0.025032
GO:0006714 sesquiterpenoid metabolic process 1.41% (1/71) 8.08 0.003701 0.025032
GO:0000245 spliceosomal complex assembly 1.41% (1/71) 8.08 0.003701 0.025032
GO:0006089 lactate metabolic process 1.41% (1/71) 8.08 0.003701 0.025032
GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione 1.41% (1/71) 8.08 0.003701 0.025032
GO:0009644 response to high light intensity 1.41% (1/71) 8.08 0.003701 0.025032
GO:0009922 fatty acid elongase activity 1.41% (1/71) 8.08 0.003701 0.025032
GO:0042182 ketone catabolic process 1.41% (1/71) 8.08 0.003701 0.025032
GO:0009438 methylglyoxal metabolic process 1.41% (1/71) 8.08 0.003701 0.025032
GO:0009642 response to light intensity 1.41% (1/71) 8.08 0.003701 0.025032
GO:0016106 sesquiterpenoid biosynthetic process 1.41% (1/71) 8.08 0.003701 0.025032
GO:0061727 methylglyoxal catabolic process to lactate 1.41% (1/71) 8.08 0.003701 0.025032
GO:0051596 methylglyoxal catabolic process 1.41% (1/71) 8.08 0.003701 0.025032
GO:0006839 mitochondrial transport 2.82% (2/71) 4.68 0.002776 0.025815
GO:0071826 protein-RNA complex organization 2.82% (2/71) 5.08 0.001618 0.026175
GO:0016788 hydrolase activity, acting on ester bonds 8.45% (6/71) 2.06 0.003169 0.028754
GO:0051604 protein maturation 2.82% (2/71) 4.49 0.003611 0.031981
GO:0008233 peptidase activity 7.04% (5/71) 2.14 0.00559 0.035854
GO:0046185 aldehyde catabolic process 1.41% (1/71) 7.49 0.005546 0.036197
GO:0046654 tetrahydrofolate biosynthetic process 1.41% (1/71) 7.49 0.005546 0.036197
GO:1901615 organic hydroxy compound metabolic process 2.82% (2/71) 4.1 0.006141 0.038718
GO:0006470 protein dephosphorylation 2.82% (2/71) 4.05 0.006524 0.040452
GO:0003933 GTP cyclohydrolase activity 1.41% (1/71) 7.08 0.007388 0.042284
GO:0004725 protein tyrosine phosphatase activity 1.41% (1/71) 7.08 0.007388 0.042284
GO:0003958 NADPH-hemoprotein reductase activity 1.41% (1/71) 7.08 0.007388 0.042284
GO:0017171 serine hydrolase activity 4.23% (3/71) 2.93 0.007325 0.043949
GO:0008236 serine-type peptidase activity 4.23% (3/71) 2.93 0.007325 0.043949
GO:0005787 signal peptidase complex 1.41% (1/71) 6.75 0.009227 0.049035
GO:0071214 cellular response to abiotic stimulus 1.41% (1/71) 6.75 0.009227 0.049035
GO:0104004 cellular response to environmental stimulus 1.41% (1/71) 6.75 0.009227 0.049035
GO:0071478 cellular response to radiation 1.41% (1/71) 6.75 0.009227 0.049035
GO:0071482 cellular response to light stimulus 1.41% (1/71) 6.75 0.009227 0.049035
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (71) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms