Coexpression cluster: Cluster_471 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006396 RNA processing 100.0% (2/2) 6.71 9.1e-05 0.002285
GO:0035145 exon-exon junction complex 50.0% (1/2) 11.9 0.000261 0.002609
GO:0034227 tRNA thio-modification 50.0% (1/2) 12.23 0.000209 0.002609
GO:0004792 thiosulfate sulfurtransferase activity 50.0% (1/2) 12.64 0.000157 0.002609
GO:0002143 tRNA wobble position uridine thiolation 50.0% (1/2) 14.23 5.2e-05 0.002609
GO:0002097 tRNA wobble base modification 50.0% (1/2) 10.77 0.000574 0.003188
GO:0005829 cytosol 50.0% (1/2) 10.9 0.000522 0.00326
GO:0002098 tRNA wobble uridine modification 50.0% (1/2) 10.9 0.000522 0.00326
GO:0008641 ubiquitin-like modifier activating enzyme activity 50.0% (1/2) 10.23 0.000835 0.003478
GO:0016070 RNA metabolic process 100.0% (2/2) 5.61 0.00042 0.003499
GO:0090304 nucleic acid metabolic process 100.0% (2/2) 5.17 0.000775 0.003525
GO:0016783 sulfurtransferase activity 50.0% (1/2) 10.42 0.00073 0.003651
GO:0016877 ligase activity, forming carbon-sulfur bonds 50.0% (1/2) 9.58 0.001304 0.004657
GO:0006139 nucleobase-containing compound metabolic process 100.0% (2/2) 4.83 0.001234 0.004745
GO:1901360 organic cyclic compound metabolic process 100.0% (2/2) 4.62 0.001655 0.004868
GO:0046483 heterocycle metabolic process 100.0% (2/2) 4.69 0.00149 0.004965
GO:0006725 cellular aromatic compound metabolic process 100.0% (2/2) 4.65 0.00159 0.004968
GO:0006400 tRNA modification 50.0% (1/2) 8.9 0.002086 0.005794
GO:0034641 cellular nitrogen compound metabolic process 100.0% (2/2) 4.41 0.002221 0.005844
GO:0016782 transferase activity, transferring sulphur-containing groups 50.0% (1/2) 8.61 0.002555 0.006387
GO:0008033 tRNA processing 50.0% (1/2) 8.25 0.003284 0.00782
GO:0110165 cellular anatomical entity 100.0% (2/2) 3.87 0.004645 0.010556
GO:0008380 RNA splicing 50.0% (1/2) 7.58 0.005211 0.011327
GO:0006399 tRNA metabolic process 50.0% (1/2) 7.18 0.006875 0.014323
GO:0034470 ncRNA processing 50.0% (1/2) 7.1 0.007291 0.014582
GO:0016874 ligase activity 50.0% (1/2) 6.82 0.00885 0.015803
GO:0005575 cellular_component 100.0% (2/2) 3.43 0.008584 0.015895
GO:0009451 RNA modification 50.0% (1/2) 6.88 0.008486 0.01632
GO:0034660 ncRNA metabolic process 50.0% (1/2) 6.46 0.01129 0.019465
GO:0043170 macromolecule metabolic process 100.0% (2/2) 3.16 0.012452 0.020753
GO:0044237 cellular metabolic process 100.0% (2/2) 3.07 0.014179 0.022154
GO:0140513 nuclear protein-containing complex 50.0% (1/2) 6.17 0.013882 0.02239
GO:0006807 nitrogen compound metabolic process 100.0% (2/2) 2.99 0.015807 0.02395
GO:0005634 nucleus 50.0% (1/2) 5.59 0.020606 0.030302
GO:0044238 primary metabolic process 100.0% (2/2) 2.71 0.023269 0.033242
GO:0140657 ATP-dependent activity 50.0% (1/2) 5.32 0.024938 0.034636
GO:0043231 intracellular membrane-bounded organelle 50.0% (1/2) 5.17 0.027615 0.035404
GO:0043227 membrane-bounded organelle 50.0% (1/2) 5.17 0.027615 0.035404
GO:0071704 organic substance metabolic process 100.0% (2/2) 2.59 0.027419 0.037052
GO:0008152 metabolic process 100.0% (2/2) 2.51 0.030937 0.038672
GO:0009987 cellular process 100.0% (2/2) 2.44 0.034127 0.041618
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (2) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms