Coexpression cluster: Cluster_188 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0035514 DNA demethylase activity 25.0% (1/4) 10.9 0.000522 0.003875
GO:0035510 DNA dealkylation 25.0% (1/4) 10.9 0.000522 0.003875
GO:0080111 DNA demethylation 25.0% (1/4) 10.9 0.000522 0.003875
GO:0016073 snRNA metabolic process 25.0% (1/4) 11.23 0.000417 0.005425
GO:0016180 snRNA processing 25.0% (1/4) 11.23 0.000417 0.005425
GO:0034472 snRNA 3'-end processing 25.0% (1/4) 12.23 0.000209 0.005426
GO:0034477 U6 snRNA 3'-end processing 25.0% (1/4) 12.23 0.000209 0.005426
GO:0006304 DNA modification 25.0% (1/4) 9.9 0.001043 0.00678
GO:0070988 demethylation 25.0% (1/4) 9.32 0.001564 0.009038
GO:0051539 4 iron, 4 sulfur cluster binding 25.0% (1/4) 8.83 0.00219 0.009488
GO:0032451 demethylase activity 25.0% (1/4) 9.06 0.001877 0.00976
GO:0019104 DNA N-glycosylase activity 25.0% (1/4) 8.9 0.002085 0.009858
GO:0006284 base-excision repair 25.0% (1/4) 8.53 0.00271 0.010067
GO:0031123 RNA 3'-end processing 25.0% (1/4) 8.58 0.002606 0.010425
GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds 25.0% (1/4) 7.77 0.004583 0.014896
GO:0090304 nucleic acid metabolic process 50.0% (2/4) 4.17 0.004482 0.015538
GO:0006139 nucleobase-containing compound metabolic process 50.0% (2/4) 3.83 0.007061 0.021599
GO:1901360 organic cyclic compound metabolic process 50.0% (2/4) 3.62 0.0094 0.022219
GO:0006725 cellular aromatic compound metabolic process 50.0% (2/4) 3.65 0.00904 0.022386
GO:0051536 iron-sulfur cluster binding 25.0% (1/4) 6.82 0.00884 0.022985
GO:0051540 metal cluster binding 25.0% (1/4) 6.82 0.00884 0.022985
GO:0046483 heterocycle metabolic process 50.0% (2/4) 3.69 0.008485 0.024512
GO:0034641 cellular nitrogen compound metabolic process 50.0% (2/4) 3.41 0.012503 0.028268
GO:0034470 ncRNA processing 25.0% (1/4) 6.1 0.014529 0.03148
GO:0140097 catalytic activity, acting on DNA 25.0% (1/4) 5.95 0.016076 0.033439
GO:0006281 DNA repair 25.0% (1/4) 5.7 0.019063 0.036713
GO:0006974 DNA damage response 25.0% (1/4) 5.64 0.019885 0.03693
GO:0004518 nuclease activity 25.0% (1/4) 5.71 0.01896 0.03792
GO:0033554 cellular response to stress 25.0% (1/4) 5.42 0.02317 0.040162
GO:0034660 ncRNA metabolic process 25.0% (1/4) 5.46 0.022452 0.040259
GO:0051716 cellular response to stimulus 25.0% (1/4) 5.36 0.024093 0.040414
GO:0016787 hydrolase activity 50.0% (2/4) 2.86 0.025885 0.042064
GO:0006259 DNA metabolic process 25.0% (1/4) 5.04 0.030022 0.047307
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (4) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms