Coexpression cluster: Cluster_53 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

View as:



Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003824 catalytic activity 52.44% (43/82) 1.16 0.0 5e-06
GO:0008150 biological_process 54.88% (45/82) 0.84 4e-06 0.000563
GO:0008152 metabolic process 39.02% (32/82) 1.15 4e-06 0.000787
GO:0003674 molecular_function 69.51% (57/82) 0.61 1.1e-05 0.001135
GO:0019637 organophosphate metabolic process 7.32% (6/82) 2.87 0.000179 0.015019
GO:0009987 cellular process 35.37% (29/82) 0.94 0.000216 0.015109
GO:0071704 organic substance metabolic process 31.71% (26/82) 0.94 0.000533 0.018598
GO:0009058 biosynthetic process 13.41% (11/82) 1.77 0.000365 0.019137
GO:0008654 phospholipid biosynthetic process 3.66% (3/82) 4.26 0.000527 0.020061
GO:0008033 tRNA processing 3.66% (3/82) 4.48 0.000341 0.02044
GO:0008610 lipid biosynthetic process 6.1% (5/82) 2.93 0.000518 0.021705
GO:0044237 cellular metabolic process 25.61% (21/82) 1.1 0.000486 0.022621
GO:0006497 protein lipidation 2.44% (2/82) 5.48 0.000924 0.027668
GO:0090407 organophosphate biosynthetic process 4.88% (4/82) 3.25 0.000865 0.027889
GO:0044238 primary metabolic process 28.05% (23/82) 0.88 0.002168 0.039502
GO:0019107 myristoyltransferase activity 1.22% (1/82) 8.87 0.002139 0.04074
GO:0018377 protein myristoylation 1.22% (1/82) 8.87 0.002139 0.04074
GO:0051751 alpha-1,4-mannosyltransferase activity 1.22% (1/82) 8.87 0.002139 0.04074
GO:0006499 N-terminal protein myristoylation 1.22% (1/82) 8.87 0.002139 0.04074
GO:0006498 N-terminal protein lipidation 1.22% (1/82) 8.87 0.002139 0.04074
GO:0004379 glycylpeptide N-tetradecanoyltransferase activity 1.22% (1/82) 8.87 0.002139 0.04074
GO:0000492 box C/D snoRNP assembly 1.22% (1/82) 8.87 0.002139 0.04074
GO:0044281 small molecule metabolic process 8.54% (7/82) 1.94 0.002347 0.040974
GO:0006399 tRNA metabolic process 3.66% (3/82) 3.41 0.002898 0.041872
GO:0006793 phosphorus metabolic process 13.41% (11/82) 1.41 0.002712 0.042088
GO:1901137 carbohydrate derivative biosynthetic process 3.66% (3/82) 3.48 0.002541 0.042588
GO:1901576 organic substance biosynthetic process 10.98% (9/82) 1.6 0.002867 0.042905
GO:1901135 carbohydrate derivative metabolic process 4.88% (4/82) 2.8 0.002665 0.042949
GO:0002949 tRNA threonylcarbamoyladenosine modification 1.22% (1/82) 7.87 0.004274 0.044767
GO:0070525 tRNA threonylcarbamoyladenosine metabolic process 1.22% (1/82) 7.87 0.004274 0.044767
GO:0004733 pyridoxamine phosphate oxidase activity 1.22% (1/82) 7.87 0.004274 0.044767
GO:0008615 pyridoxine biosynthetic process 1.22% (1/82) 7.87 0.004274 0.044767
GO:0000491 small nucleolar ribonucleoprotein complex assembly 1.22% (1/82) 7.87 0.004274 0.044767
GO:0008614 pyridoxine metabolic process 1.22% (1/82) 7.87 0.004274 0.044767
GO:0080132 fatty acid alpha-hydroxylase activity 1.22% (1/82) 7.87 0.004274 0.044767
GO:0034470 ncRNA processing 3.66% (3/82) 3.32 0.00342 0.046226
GO:0006400 tRNA modification 2.44% (2/82) 4.55 0.003344 0.046711
GO:0005975 carbohydrate metabolic process 7.32% (6/82) 2.03 0.003639 0.047648
GO:0004802 transketolase activity 1.22% (1/82) 7.28 0.006404 0.047914
GO:0046349 amino sugar biosynthetic process 1.22% (1/82) 7.28 0.006404 0.047914
GO:0016920 pyroglutamyl-peptidase activity 1.22% (1/82) 7.28 0.006404 0.047914
GO:0006048 UDP-N-acetylglucosamine biosynthetic process 1.22% (1/82) 7.28 0.006404 0.047914
GO:0006047 UDP-N-acetylglucosamine metabolic process 1.22% (1/82) 7.28 0.006404 0.047914
GO:0004343 glucosamine 6-phosphate N-acetyltransferase activity 1.22% (1/82) 7.28 0.006404 0.047914
GO:0015976 carbon utilization 1.22% (1/82) 7.28 0.006404 0.047914
GO:0004764 shikimate 3-dehydrogenase (NADP+) activity 1.22% (1/82) 7.28 0.006404 0.047914
GO:0000234 phosphoethanolamine N-methyltransferase activity 1.22% (1/82) 7.28 0.006404 0.047914
GO:0019632 shikimate metabolic process 1.22% (1/82) 7.28 0.006404 0.047914
GO:0004020 adenylylsulfate kinase activity 1.22% (1/82) 7.28 0.006404 0.047914
GO:0003855 3-dehydroquinate dehydratase activity 1.22% (1/82) 7.28 0.006404 0.047914
GO:0016836 hydro-lyase activity 2.44% (2/82) 4.04 0.006684 0.049136
GO:0016829 lyase activity 4.88% (4/82) 2.56 0.004839 0.049452
GO:0006644 phospholipid metabolic process 3.66% (3/82) 3.25 0.003921 0.049785
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (82) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms