Coexpression cluster: Cluster_50 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003756 protein disulfide isomerase activity 3.08% (2/65) 7.4 5.9e-05 0.006366
GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds 3.08% (2/65) 7.4 5.9e-05 0.006366
GO:0003674 molecular_function 70.77% (46/65) 0.63 3.7e-05 0.01194
GO:0042393 histone binding 3.08% (2/65) 6.2 0.000335 0.027015
GO:0044087 regulation of cellular component biogenesis 3.08% (2/65) 6.03 0.000426 0.027495
GO:0000386 second spliceosomal transesterification activity 1.54% (1/65) 8.2 0.003388 0.03127
GO:0043242 negative regulation of protein-containing complex disassembly 1.54% (1/65) 8.2 0.003388 0.03127
GO:0032272 negative regulation of protein polymerization 1.54% (1/65) 8.2 0.003388 0.03127
GO:0031333 negative regulation of protein-containing complex assembly 1.54% (1/65) 8.2 0.003388 0.03127
GO:0030837 negative regulation of actin filament polymerization 1.54% (1/65) 8.2 0.003388 0.03127
GO:0030835 negative regulation of actin filament depolymerization 1.54% (1/65) 8.2 0.003388 0.03127
GO:0030834 regulation of actin filament depolymerization 1.54% (1/65) 8.2 0.003388 0.03127
GO:0008290 F-actin capping protein complex 1.54% (1/65) 8.2 0.003388 0.03127
GO:0030628 pre-mRNA 3'-splice site binding 1.54% (1/65) 8.2 0.003388 0.03127
GO:0051016 barbed-end actin filament capping 1.54% (1/65) 8.2 0.003388 0.03127
GO:0051494 negative regulation of cytoskeleton organization 1.54% (1/65) 8.2 0.003388 0.03127
GO:0051693 actin filament capping 1.54% (1/65) 8.2 0.003388 0.03127
GO:0070628 proteasome binding 1.54% (1/65) 8.2 0.003388 0.03127
GO:0036002 pre-mRNA binding 1.54% (1/65) 8.2 0.003388 0.03127
GO:1902904 negative regulation of supramolecular fiber organization 1.54% (1/65) 8.2 0.003388 0.03127
GO:1901880 negative regulation of protein depolymerization 1.54% (1/65) 8.2 0.003388 0.03127
GO:1901879 regulation of protein depolymerization 1.54% (1/65) 8.2 0.003388 0.03127
GO:0005773 vacuole 1.54% (1/65) 9.2 0.001696 0.03912
GO:0000323 lytic vacuole 1.54% (1/65) 9.2 0.001696 0.03912
GO:0140033 acetylation-dependent protein binding 1.54% (1/65) 9.2 0.001696 0.03912
GO:0140030 modification-dependent protein binding 1.54% (1/65) 9.2 0.001696 0.03912
GO:0070577 lysine-acetylated histone binding 1.54% (1/65) 9.2 0.001696 0.03912
GO:0016504 peptidase activator activity 1.54% (1/65) 9.2 0.001696 0.03912
GO:0005764 lysosome 1.54% (1/65) 9.2 0.001696 0.03912
GO:0023051 regulation of signaling 3.08% (2/65) 4.85 0.002224 0.039917
GO:0010646 regulation of cell communication 3.08% (2/65) 4.85 0.002224 0.039917
GO:0009966 regulation of signal transduction 3.08% (2/65) 4.85 0.002224 0.039917
GO:1901891 regulation of cell septum assembly 1.54% (1/65) 7.62 0.005078 0.041008
GO:0032955 regulation of division septum assembly 1.54% (1/65) 7.62 0.005078 0.041008
GO:0032954 regulation of cytokinetic process 1.54% (1/65) 7.62 0.005078 0.041008
GO:0016853 isomerase activity 4.62% (3/65) 3.1 0.00523 0.041199
GO:0003676 nucleic acid binding 16.92% (11/65) 1.29 0.004734 0.042473
GO:0051128 regulation of cellular component organization 3.08% (2/65) 4.25 0.005014 0.043769
GO:0090304 nucleic acid metabolic process 10.77% (7/65) 1.95 0.002182 0.046989
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (65) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms