Coexpression cluster: Cluster_95 (Setaria viridis HCCA coexpression clusters - Anderson et al (2021))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003674 molecular_function 65.31% (177/271) 0.52 0.0 0.0
GO:0008150 biological_process 47.6% (129/271) 0.64 0.0 1e-06
GO:0003824 catalytic activity 38.75% (105/271) 0.73 0.0 3e-06
GO:0044238 primary metabolic process 28.41% (77/271) 0.9 0.0 4e-06
GO:0032991 protein-containing complex 9.96% (27/271) 1.73 0.0 8e-06
GO:0005575 cellular_component 19.93% (54/271) 1.1 0.0 9e-06
GO:1902494 catalytic complex 5.17% (14/271) 2.57 0.0 1.5e-05
GO:0071704 organic substance metabolic process 29.15% (79/271) 0.82 0.0 1.6e-05
GO:0008152 metabolic process 30.26% (82/271) 0.78 0.0 2e-05
GO:0006807 nitrogen compound metabolic process 23.62% (64/271) 0.91 0.0 3.1e-05
GO:1901564 organonitrogen compound metabolic process 19.56% (53/271) 0.99 1e-06 6.7e-05
GO:0043170 macromolecule metabolic process 20.66% (56/271) 0.89 4e-06 0.000262
GO:0072594 establishment of protein localization to organelle 2.21% (6/271) 3.64 9e-06 0.000554
GO:0033365 protein localization to organelle 2.21% (6/271) 3.62 1e-05 0.000561
GO:0009057 macromolecule catabolic process 3.69% (10/271) 2.52 1.1e-05 0.000611
GO:0051603 proteolysis involved in protein catabolic process 2.95% (8/271) 2.89 1.4e-05 0.000723
GO:0005839 proteasome core complex 1.48% (4/271) 4.62 1.9e-05 0.00087
GO:0030163 protein catabolic process 1.85% (5/271) 3.94 1.8e-05 0.000871
GO:0009987 cellular process 28.78% (78/271) 0.64 2.2e-05 0.000946
GO:0051234 establishment of localization 9.59% (26/271) 1.28 3.3e-05 0.001313
GO:0051641 cellular localization 4.06% (11/271) 2.19 3.6e-05 0.001368
GO:0051179 localization 9.59% (26/271) 1.26 3.9e-05 0.001436
GO:0072657 protein localization to membrane 1.48% (4/271) 4.29 5e-05 0.001693
GO:0090150 establishment of protein localization to membrane 1.48% (4/271) 4.29 5e-05 0.001693
GO:0044272 sulfur compound biosynthetic process 1.85% (5/271) 3.56 6.8e-05 0.001945
GO:0046907 intracellular transport 3.32% (9/271) 2.38 6.6e-05 0.001978
GO:0045184 establishment of protein localization 3.32% (9/271) 2.38 6.6e-05 0.001978
GO:0070727 cellular macromolecule localization 3.32% (9/271) 2.35 8e-05 0.00201
GO:0033036 macromolecule localization 3.32% (9/271) 2.35 8e-05 0.00201
GO:0008104 protein localization 3.32% (9/271) 2.35 8e-05 0.00201
GO:0051649 establishment of localization in cell 3.32% (9/271) 2.37 7.3e-05 0.002022
GO:0005488 binding 39.85% (108/271) 0.45 9.8e-05 0.002124
GO:0051668 localization within membrane 1.48% (4/271) 4.19 6.6e-05 0.00213
GO:0098796 membrane protein complex 3.32% (9/271) 2.31 9.6e-05 0.002139
GO:0006790 sulfur compound metabolic process 2.21% (6/271) 3.04 9.5e-05 0.002189
GO:0004298 threonine-type endopeptidase activity 1.11% (3/271) 5.03 9.5e-05 0.002245
GO:0036402 proteasome-activating activity 1.11% (3/271) 5.03 9.5e-05 0.002245
GO:0072599 establishment of protein localization to endoplasmic reticulum 1.11% (3/271) 4.82 0.000149 0.002404
GO:0006612 protein targeting to membrane 1.11% (3/271) 4.82 0.000149 0.002404
GO:0070972 protein localization to endoplasmic reticulum 1.11% (3/271) 4.82 0.000149 0.002404
GO:0070003 threonine-type peptidase activity 1.11% (3/271) 4.82 0.000149 0.002404
GO:0006613 cotranslational protein targeting to membrane 1.11% (3/271) 4.82 0.000149 0.002404
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 1.11% (3/271) 4.82 0.000149 0.002404
GO:0045047 protein targeting to ER 1.11% (3/271) 4.82 0.000149 0.002404
GO:0006886 intracellular protein transport 2.58% (7/271) 2.69 0.000115 0.002437
GO:0019538 protein metabolic process 14.76% (40/271) 0.88 0.000126 0.002608
GO:0006810 transport 8.86% (24/271) 1.19 0.000169 0.002669
GO:0005783 endoplasmic reticulum 1.48% (4/271) 3.93 0.000134 0.002702
GO:0009967 positive regulation of signal transduction 0.74% (2/271) 6.56 0.000149 0.002783
GO:0023056 positive regulation of signaling 0.74% (2/271) 6.56 0.000149 0.002783
GO:0010647 positive regulation of cell communication 0.74% (2/271) 6.56 0.000149 0.002783
GO:0140535 intracellular protein-containing complex 2.58% (7/271) 2.42 0.000368 0.005697
GO:0019637 organophosphate metabolic process 3.69% (10/271) 1.88 0.000448 0.006808
GO:0016787 hydrolase activity 12.55% (34/271) 0.87 0.000533 0.0078
GO:0018193 peptidyl-amino acid modification 1.85% (5/271) 2.93 0.000533 0.007941
GO:1990234 transferase complex 2.21% (6/271) 2.56 0.000583 0.008382
GO:0005737 cytoplasm 2.58% (7/271) 2.27 0.000698 0.009853
GO:0006448 regulation of translational elongation 0.74% (2/271) 5.56 0.000733 0.010174
GO:1901575 organic substance catabolic process 4.43% (12/271) 1.56 0.000892 0.012164
GO:0003723 RNA binding 5.17% (14/271) 1.41 0.000931 0.012491
GO:0052646 alditol phosphate metabolic process 0.74% (2/271) 5.34 0.001021 0.013052
GO:0006072 glycerol-3-phosphate metabolic process 0.74% (2/271) 5.34 0.001021 0.013052
GO:0015031 protein transport 2.58% (7/271) 2.18 0.000997 0.013161
GO:0048193 Golgi vesicle transport 1.48% (4/271) 3.17 0.001049 0.013191
GO:0006605 protein targeting 1.11% (3/271) 3.87 0.001114 0.013192
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport 1.11% (3/271) 3.87 0.001114 0.013192
GO:0043413 macromolecule glycosylation 1.85% (5/271) 2.7 0.001093 0.013329
GO:0006486 protein glycosylation 1.85% (5/271) 2.7 0.001093 0.013329
GO:1901565 organonitrogen compound catabolic process 2.21% (6/271) 2.37 0.001147 0.01338
GO:0030120 vesicle coat 1.11% (3/271) 3.82 0.001232 0.013771
GO:0000097 sulfur amino acid biosynthetic process 1.11% (3/271) 3.82 0.001232 0.013771
GO:0009056 catabolic process 4.43% (12/271) 1.51 0.001209 0.013909
GO:0070085 glycosylation 1.85% (5/271) 2.65 0.001283 0.014152
GO:0140096 catalytic activity, acting on a protein 11.81% (32/271) 0.82 0.001347 0.014658
GO:0000096 sulfur amino acid metabolic process 1.11% (3/271) 3.68 0.00163 0.017491
GO:1901360 organic cyclic compound metabolic process 8.12% (22/271) 1.0 0.001775 0.0188
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 1.85% (5/271) 2.54 0.001801 0.018823
GO:0030127 COPII vesicle coat 0.74% (2/271) 4.82 0.002158 0.021451
GO:0017183 protein histidyl modification to diphthamide 0.74% (2/271) 4.82 0.002158 0.021451
GO:0018202 peptidyl-histidine modification 0.74% (2/271) 4.82 0.002158 0.021451
GO:0046483 heterocycle metabolic process 7.75% (21/271) 1.01 0.002089 0.021562
GO:0000148 1,3-beta-D-glucan synthase complex 0.74% (2/271) 4.68 0.002626 0.024578
GO:0006075 (1->3)-beta-D-glucan biosynthetic process 0.74% (2/271) 4.68 0.002626 0.024578
GO:0003843 1,3-beta-D-glucan synthase activity 0.74% (2/271) 4.68 0.002626 0.024578
GO:0006074 (1->3)-beta-D-glucan metabolic process 0.74% (2/271) 4.68 0.002626 0.024578
GO:0048584 positive regulation of response to stimulus 0.74% (2/271) 4.68 0.002626 0.024578
GO:0017111 ribonucleoside triphosphate phosphatase activity 3.69% (10/271) 1.54 0.002678 0.024776
GO:0019941 modification-dependent protein catabolic process 1.85% (5/271) 2.39 0.002797 0.025016
GO:0006511 ubiquitin-dependent protein catabolic process 1.85% (5/271) 2.39 0.002797 0.025016
GO:0043632 modification-dependent macromolecule catabolic process 1.85% (5/271) 2.39 0.002797 0.025016
GO:0016740 transferase activity 15.13% (41/271) 0.64 0.002862 0.025316
GO:0008312 7S RNA binding 0.74% (2/271) 4.56 0.003136 0.026575
GO:0048500 signal recognition particle 0.74% (2/271) 4.56 0.003136 0.026575
GO:0006725 cellular aromatic compound metabolic process 7.75% (21/271) 0.96 0.003058 0.026756
GO:0044281 small molecule metabolic process 5.17% (14/271) 1.22 0.003228 0.026787
GO:0044237 cellular metabolic process 17.71% (48/271) 0.57 0.003204 0.026865
GO:0035639 purine ribonucleoside triphosphate binding 11.44% (31/271) 0.75 0.003275 0.026898
GO:1901135 carbohydrate derivative metabolic process 2.58% (7/271) 1.89 0.003122 0.027023
GO:0006606 protein import into nucleus 0.74% (2/271) 4.44 0.003689 0.028556
GO:0006535 cysteine biosynthetic process from serine 0.74% (2/271) 4.44 0.003689 0.028556
GO:0019344 cysteine biosynthetic process 0.74% (2/271) 4.44 0.003689 0.028556
GO:0034504 protein localization to nucleus 0.74% (2/271) 4.44 0.003689 0.028556
GO:0030117 membrane coat 1.11% (3/271) 3.27 0.003736 0.028642
GO:0006139 nucleobase-containing compound metabolic process 7.01% (19/271) 1.0 0.003587 0.028876
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors 1.85% (5/271) 2.31 0.003579 0.029104
GO:0016579 protein deubiquitination 1.11% (3/271) 3.24 0.003982 0.030241
GO:0016462 pyrophosphatase activity 3.69% (10/271) 1.45 0.004074 0.030649
GO:0051170 import into nucleus 0.74% (2/271) 4.34 0.004284 0.031932
GO:0070646 protein modification by small protein removal 1.11% (3/271) 3.17 0.004503 0.033259
GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 3.69% (10/271) 1.42 0.004772 0.034922
GO:0016817 hydrolase activity, acting on acid anhydrides 3.69% (10/271) 1.41 0.004897 0.035514
GO:0061630 ubiquitin protein ligase activity 1.48% (4/271) 2.54 0.005061 0.035737
GO:0034641 cellular nitrogen compound metabolic process 8.49% (23/271) 0.85 0.004973 0.035747
GO:0004842 ubiquitin-protein transferase activity 2.21% (6/271) 1.94 0.00505 0.035976
GO:0061659 ubiquitin-like protein ligase activity 1.48% (4/271) 2.53 0.005248 0.036733
GO:0019787 ubiquitin-like protein transferase activity 2.21% (6/271) 1.91 0.005619 0.038662
GO:0043412 macromolecule modification 9.96% (27/271) 0.76 0.005593 0.038815
GO:0006534 cysteine metabolic process 0.74% (2/271) 3.97 0.00707 0.040364
GO:1901001 negative regulation of response to salt stress 0.37% (1/271) 7.14 0.007069 0.040649
GO:0004370 glycerol kinase activity 0.37% (1/271) 7.14 0.007069 0.040649
GO:0070773 protein-N-terminal glutamine amidohydrolase activity 0.37% (1/271) 7.14 0.007069 0.040649
GO:1901000 regulation of response to salt stress 0.37% (1/271) 7.14 0.007069 0.040649
GO:0047484 regulation of response to osmotic stress 0.37% (1/271) 7.14 0.007069 0.040649
GO:1903432 regulation of TORC1 signaling 0.37% (1/271) 7.14 0.007069 0.040649
GO:0032006 regulation of TOR signaling 0.37% (1/271) 7.14 0.007069 0.040649
GO:0031307 obsolete integral component of mitochondrial outer membrane 0.37% (1/271) 7.14 0.007069 0.040649
GO:0007096 regulation of exit from mitosis 0.37% (1/271) 7.14 0.007069 0.040649
GO:0047641 aldose-6-phosphate reductase (NADPH) activity 0.37% (1/271) 7.14 0.007069 0.040649
GO:0032008 positive regulation of TOR signaling 0.37% (1/271) 7.14 0.007069 0.040649
GO:0071108 protein K48-linked deubiquitination 0.37% (1/271) 7.14 0.007069 0.040649
GO:1904263 positive regulation of TORC1 signaling 0.37% (1/271) 7.14 0.007069 0.040649
GO:0047793 cycloeucalenol cycloisomerase activity 0.37% (1/271) 7.14 0.007069 0.040649
GO:0034998 oligosaccharyltransferase I complex 0.37% (1/271) 7.14 0.007069 0.040649
GO:0090227 regulation of red or far-red light signaling pathway 0.37% (1/271) 7.14 0.007069 0.040649
GO:0003952 NAD+ synthase (glutamine-hydrolyzing) activity 0.37% (1/271) 7.14 0.007069 0.040649
GO:1902533 positive regulation of intracellular signal transduction 0.37% (1/271) 7.14 0.007069 0.040649
GO:0090228 positive regulation of red or far-red light signaling pathway 0.37% (1/271) 7.14 0.007069 0.040649
GO:0004573 Glc3Man9GlcNAc2 oligosaccharide glucosidase activity 0.37% (1/271) 7.14 0.007069 0.040649
GO:0006163 purine nucleotide metabolic process 1.85% (5/271) 2.07 0.007201 0.040823
GO:0004843 cysteine-type deubiquitinase activity 1.11% (3/271) 2.92 0.007349 0.041081
GO:0036211 protein modification process 9.23% (25/271) 0.76 0.007336 0.041299
GO:0016755 aminoacyltransferase activity 2.21% (6/271) 1.88 0.006107 0.041664
GO:0043167 ion binding 18.82% (51/271) 0.49 0.007687 0.042387
GO:0140657 ATP-dependent activity 3.32% (9/271) 1.4 0.007645 0.042444
GO:0016192 vesicle-mediated transport 2.21% (6/271) 1.81 0.007757 0.042478
GO:0007005 mitochondrion organization 0.74% (2/271) 4.06 0.006314 0.042711
GO:0017076 purine nucleotide binding 12.55% (34/271) 0.62 0.008251 0.044879
GO:0006508 proteolysis 4.06% (11/271) 1.27 0.006753 0.045304
GO:0055086 nucleobase-containing small molecule metabolic process 2.21% (6/271) 1.77 0.008692 0.046961
GO:0072521 purine-containing compound metabolic process 1.85% (5/271) 1.98 0.009103 0.048854
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (271) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms