Coexpression cluster: Cluster_30 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003676 nucleic acid binding 20.67% (31/150) 1.42 0.0 0.000178
GO:0003723 RNA binding 10.0% (15/150) 2.15 2e-06 0.000388
GO:0140097 catalytic activity, acting on DNA 4.67% (7/150) 3.25 1e-05 0.001156
GO:0097159 organic cyclic compound binding 32.67% (49/150) 0.88 8e-06 0.001202
GO:0043170 macromolecule metabolic process 24.67% (37/150) 1.01 2e-05 0.001584
GO:0005488 binding 48.0% (72/150) 0.61 1.7e-05 0.001601
GO:0006807 nitrogen compound metabolic process 26.0% (39/150) 0.92 4.9e-05 0.002923
GO:0003674 molecular_function 64.67% (97/150) 0.41 4.9e-05 0.003303
GO:0006259 DNA metabolic process 5.33% (8/150) 2.56 7e-05 0.003322
GO:0034641 cellular nitrogen compound metabolic process 14.0% (21/150) 1.36 6.5e-05 0.003456
GO:0090304 nucleic acid metabolic process 10.0% (15/150) 1.64 0.000103 0.004434
GO:0140640 catalytic activity, acting on a nucleic acid 6.67% (10/150) 2.09 0.000137 0.005415
GO:1990904 ribonucleoprotein complex 4.0% (6/150) 2.82 0.000223 0.007577
GO:0042138 meiotic DNA double-strand break formation 1.33% (2/150) 6.43 0.00021 0.00769
GO:1903046 meiotic cell cycle process 2.0% (3/150) 4.53 0.000292 0.009235
GO:0061982 meiosis I cell cycle process 1.33% (2/150) 6.17 0.000315 0.009344
GO:0006139 nucleobase-containing compound metabolic process 10.67% (16/150) 1.41 0.00037 0.010339
GO:0005524 ATP binding 14.0% (21/150) 1.11 0.00074 0.017566
GO:0044237 cellular metabolic process 22.67% (34/150) 0.81 0.000728 0.0182
GO:0022402 cell cycle process 2.67% (4/150) 3.33 0.000695 0.018338
GO:0044238 primary metabolic process 26.67% (40/150) 0.71 0.000865 0.01956
GO:0035639 purine ribonucleoside triphosphate binding 14.67% (22/150) 1.04 0.00099 0.02137
GO:0046483 heterocycle metabolic process 10.67% (16/150) 1.27 0.001036 0.021405
GO:0008094 ATP-dependent activity, acting on DNA 2.67% (4/150) 3.16 0.00109 0.021577
GO:0008312 7S RNA binding 1.33% (2/150) 5.3 0.001137 0.021596
GO:0140658 ATP-dependent chromatin remodeler activity 2.0% (3/150) 3.85 0.001193 0.021789
GO:0006725 cellular aromatic compound metabolic process 10.67% (16/150) 1.24 0.001293 0.022745
GO:0048500 signal recognition particle 1.33% (2/150) 5.17 0.00136 0.023069
GO:1901360 organic cyclic compound metabolic process 10.67% (16/150) 1.21 0.00158 0.025872
GO:0016787 hydrolase activity 14.0% (21/150) 0.98 0.00222 0.027746
GO:0071704 organic substance metabolic process 27.33% (41/150) 0.63 0.00218 0.027984
GO:0006613 cotranslational protein targeting to membrane 1.33% (2/150) 4.85 0.002144 0.028286
GO:0006614 SRP-dependent cotranslational protein targeting to membrane 1.33% (2/150) 4.85 0.002144 0.028286
GO:0006612 protein targeting to membrane 1.33% (2/150) 4.85 0.002144 0.028286
GO:0070972 protein localization to endoplasmic reticulum 1.33% (2/150) 4.85 0.002144 0.028286
GO:0045047 protein targeting to ER 1.33% (2/150) 4.85 0.002144 0.028286
GO:0072599 establishment of protein localization to endoplasmic reticulum 1.33% (2/150) 4.85 0.002144 0.028286
GO:0009987 cellular process 30.0% (45/150) 0.59 0.002085 0.033017
GO:0003887 DNA-directed DNA polymerase activity 1.33% (2/150) 4.59 0.003096 0.037702
GO:0033365 protein localization to organelle 2.0% (3/150) 3.25 0.003898 0.038577
GO:0032559 adenyl ribonucleotide binding 14.0% (21/150) 0.91 0.003892 0.039338
GO:0000166 nucleotide binding 16.0% (24/150) 0.83 0.003864 0.039897
GO:1901265 nucleoside phosphate binding 16.0% (24/150) 0.83 0.003864 0.039897
GO:0034061 DNA polymerase activity 1.33% (2/150) 4.51 0.003449 0.039961
GO:0072594 establishment of protein localization to organelle 2.0% (3/150) 3.28 0.003739 0.040363
GO:0008152 metabolic process 28.0% (42/150) 0.56 0.004707 0.040655
GO:0022414 reproductive process 2.0% (3/150) 3.32 0.003432 0.040756
GO:0016780 phosphotransferase activity, for other substituted phosphate groups 1.33% (2/150) 4.36 0.00421 0.040815
GO:0032555 purine ribonucleotide binding 14.67% (22/150) 0.86 0.004662 0.041006
GO:0016772 transferase activity, transferring phosphorus-containing groups 10.67% (16/150) 1.09 0.003717 0.041064
GO:0016779 nucleotidyltransferase activity 2.67% (4/150) 2.68 0.003638 0.041141
GO:1990814 DNA/DNA annealing activity 0.67% (1/150) 7.76 0.004624 0.041442
GO:0036310 ATP-dependent DNA/DNA annealing activity 0.67% (1/150) 7.76 0.004624 0.041442
GO:0000212 meiotic spindle organization 0.67% (1/150) 7.76 0.004624 0.041442
GO:0140666 annealing activity 0.67% (1/150) 7.76 0.004624 0.041442
GO:0032553 ribonucleotide binding 14.67% (22/150) 0.84 0.005393 0.045743
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (150) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms