Coexpression cluster: Cluster_21 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0003700 DNA-binding transcription factor activity 13.29% (19/143) 2.45 0.0 0.0
GO:0043565 sequence-specific DNA binding 9.09% (13/143) 3.27 0.0 0.0
GO:0140110 transcription regulator activity 13.29% (19/143) 2.36 0.0 1e-06
GO:0050794 regulation of cellular process 19.58% (28/143) 1.76 0.0 1e-06
GO:0050789 regulation of biological process 19.58% (28/143) 1.67 0.0 3e-06
GO:0065007 biological regulation 19.58% (28/143) 1.63 0.0 4e-06
GO:0019219 regulation of nucleobase-containing compound metabolic process 14.69% (21/143) 1.92 0.0 5e-06
GO:0051252 regulation of RNA metabolic process 14.69% (21/143) 1.94 0.0 5e-06
GO:0003677 DNA binding 15.38% (22/143) 1.87 0.0 5e-06
GO:0006355 regulation of DNA-templated transcription 14.69% (21/143) 1.95 0.0 5e-06
GO:2001141 regulation of RNA biosynthetic process 14.69% (21/143) 1.95 0.0 5e-06
GO:0009889 regulation of biosynthetic process 14.69% (21/143) 1.81 1e-06 1.1e-05
GO:0031326 regulation of cellular biosynthetic process 14.69% (21/143) 1.81 1e-06 1.1e-05
GO:0080090 regulation of primary metabolic process 14.69% (21/143) 1.83 0.0 1.2e-05
GO:0010556 regulation of macromolecule biosynthetic process 14.69% (21/143) 1.81 1e-06 1.2e-05
GO:0051171 regulation of nitrogen compound metabolic process 14.69% (21/143) 1.83 0.0 1.2e-05
GO:0010468 regulation of gene expression 14.69% (21/143) 1.82 1e-06 1.3e-05
GO:0031323 regulation of cellular metabolic process 14.69% (21/143) 1.75 1e-06 2e-05
GO:0060255 regulation of macromolecule metabolic process 14.69% (21/143) 1.74 1e-06 2.1e-05
GO:0019222 regulation of metabolic process 14.69% (21/143) 1.73 1e-06 2.4e-05
GO:0005992 trehalose biosynthetic process 2.1% (3/143) 5.09 9.1e-05 0.001405
GO:0005991 trehalose metabolic process 2.1% (3/143) 5.02 0.000105 0.00156
GO:0051087 protein-folding chaperone binding 2.1% (3/143) 4.77 0.00018 0.002547
GO:0046351 disaccharide biosynthetic process 2.1% (3/143) 4.66 0.000227 0.003084
GO:0009312 oligosaccharide biosynthetic process 2.1% (3/143) 4.6 0.000253 0.003305
GO:0007165 signal transduction 5.59% (8/143) 2.21 0.000371 0.004652
GO:0005984 disaccharide metabolic process 2.1% (3/143) 4.32 0.000454 0.005483
GO:0009311 oligosaccharide metabolic process 2.1% (3/143) 4.24 0.000538 0.006268
GO:0003676 nucleic acid binding 16.08% (23/143) 1.06 0.000608 0.00683
GO:0004805 trehalose-phosphatase activity 1.4% (2/143) 5.37 0.001034 0.011237
GO:0007166 cell surface receptor signaling pathway 2.8% (4/143) 3.01 0.001607 0.016902
GO:0019203 carbohydrate phosphatase activity 1.4% (2/143) 4.5 0.00348 0.035457
GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity 0.7% (1/143) 7.83 0.004408 0.042268
GO:1902358 sulfate transmembrane transport 0.7% (1/143) 7.83 0.004408 0.042268
GO:0045735 nutrient reservoir activity 1.4% (2/143) 4.24 0.004998 0.046551
GO:0030246 carbohydrate binding 3.5% (5/143) 2.17 0.005298 0.047977
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (143) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms