Coexpression cluster: Cluster_277 (Brachypodium distachyon HCCA coexpression clusters - v0.2 (X-meeting 2023))

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Average Expression Profile

Enriched GO Terms (corrected p-value < 0.05) (download table)
ID Label % in cluster Enrichment log2 p-value Corrected p-value
GO:0006260 DNA replication 7.94% (5/63) 5.16 0.0 9.3e-05
GO:0061695 transferase complex, transferring phosphorus-containing groups 6.35% (4/63) 5.69 1e-06 0.000117
GO:0042575 DNA polymerase complex 4.76% (3/63) 7.27 1e-06 0.00013
GO:0034061 DNA polymerase activity 4.76% (3/63) 6.35 7e-06 0.000346
GO:0003887 DNA-directed DNA polymerase activity 4.76% (3/63) 6.42 6e-06 0.00035
GO:0090304 nucleic acid metabolic process 17.46% (11/63) 2.44 5e-06 0.00037
GO:0003676 nucleic acid binding 25.4% (16/63) 1.72 1.7e-05 0.000747
GO:0006259 DNA metabolic process 9.52% (6/63) 3.4 2.3e-05 0.000893
GO:0006139 nucleobase-containing compound metabolic process 17.46% (11/63) 2.12 3.8e-05 0.001202
GO:0097159 organic cyclic compound binding 39.68% (25/63) 1.16 3.6e-05 0.001263
GO:0032559 adenyl ribonucleotide binding 23.81% (15/63) 1.67 4.7e-05 0.001333
GO:0009360 DNA polymerase III complex 3.17% (2/63) 7.42 5.5e-05 0.00145
GO:0005488 binding 55.56% (35/63) 0.82 6.4e-05 0.001548
GO:0030554 adenyl nucleotide binding 23.81% (15/63) 1.6 8.4e-05 0.001893
GO:0046483 heterocycle metabolic process 17.46% (11/63) 1.98 9.1e-05 0.001905
GO:0032555 purine ribonucleotide binding 23.81% (15/63) 1.56 0.000116 0.001915
GO:0006725 cellular aromatic compound metabolic process 17.46% (11/63) 1.95 0.00011 0.001918
GO:0000166 nucleotide binding 25.4% (16/63) 1.5 0.000104 0.001918
GO:1901265 nucleoside phosphate binding 25.4% (16/63) 1.5 0.000104 0.001918
GO:0032553 ribonucleotide binding 23.81% (15/63) 1.54 0.000133 0.001992
GO:1901360 organic cyclic compound metabolic process 17.46% (11/63) 1.92 0.000131 0.002051
GO:0097367 carbohydrate derivative binding 23.81% (15/63) 1.52 0.000151 0.002061
GO:1990234 transferase complex 6.35% (4/63) 3.91 0.000149 0.002134
GO:1901363 heterocyclic compound binding 25.4% (16/63) 1.45 0.000163 0.002138
GO:0036094 small molecule binding 25.4% (16/63) 1.43 0.00018 0.002171
GO:0005524 ATP binding 20.63% (13/63) 1.66 0.000176 0.002211
GO:0017076 purine nucleotide binding 23.81% (15/63) 1.49 0.000201 0.002341
GO:0043168 anion binding 23.81% (15/63) 1.39 0.000402 0.004512
GO:0035639 purine ribonucleoside triphosphate binding 20.63% (13/63) 1.53 0.000428 0.004637
GO:0034641 cellular nitrogen compound metabolic process 17.46% (11/63) 1.68 0.000537 0.005622
GO:0009987 cellular process 38.1% (24/63) 0.94 0.000652 0.006599
GO:0043170 macromolecule metabolic process 26.98% (17/63) 1.14 0.00115 0.011283
GO:0003674 molecular_function 68.25% (43/63) 0.49 0.001224 0.011645
GO:0043167 ion binding 28.57% (18/63) 1.03 0.00195 0.015304
GO:0009029 tetraacyldisaccharide 4'-kinase activity 1.59% (1/63) 9.01 0.001942 0.015636
GO:0008353 RNA polymerase II CTD heptapeptide repeat kinase activity 1.59% (1/63) 9.01 0.001942 0.015636
GO:0004712 protein serine/threonine/tyrosine kinase activity 1.59% (1/63) 9.01 0.001942 0.015636
GO:0070985 transcription factor TFIIK complex 1.59% (1/63) 9.01 0.001942 0.015636
GO:0006480 N-terminal protein amino acid methylation 1.59% (1/63) 9.01 0.001942 0.015636
GO:0051304 chromosome separation 1.59% (1/63) 9.01 0.001942 0.015636
GO:0044237 cellular metabolic process 26.98% (17/63) 1.06 0.002189 0.016766
GO:0016779 nucleotidyltransferase activity 4.76% (3/63) 3.52 0.002332 0.017438
GO:0008150 biological_process 50.79% (32/63) 0.63 0.002392 0.017464
GO:0140640 catalytic activity, acting on a nucleic acid 7.94% (5/63) 2.34 0.003104 0.022149
GO:0016070 RNA metabolic process 9.52% (6/63) 2.03 0.003458 0.024129
GO:0008622 epsilon DNA polymerase complex 1.59% (1/63) 8.01 0.00388 0.024369
GO:0008139 nuclear localization sequence binding 1.59% (1/63) 8.01 0.00388 0.024369
GO:0000974 Prp19 complex 1.59% (1/63) 8.01 0.00388 0.024369
GO:0140097 catalytic activity, acting on DNA 4.76% (3/63) 3.28 0.0037 0.025254
GO:0006807 nitrogen compound metabolic process 26.98% (17/63) 0.97 0.004106 0.025281
GO:1902494 catalytic complex 6.35% (4/63) 2.66 0.003784 0.025281
GO:0140535 intracellular protein-containing complex 4.76% (3/63) 3.2 0.004315 0.026055
GO:0032806 carboxy-terminal domain protein kinase complex 1.59% (1/63) 7.42 0.005815 0.033814
GO:0005675 transcription factor TFIIH holo complex 1.59% (1/63) 7.42 0.005815 0.033814
GO:0032991 protein-containing complex 11.11% (7/63) 1.66 0.006519 0.037216
GO:1901271 lipooligosaccharide biosynthetic process 1.59% (1/63) 7.01 0.007746 0.041225
GO:1901269 lipooligosaccharide metabolic process 1.59% (1/63) 7.01 0.007746 0.041225
GO:0046493 lipid A metabolic process 1.59% (1/63) 7.01 0.007746 0.041225
GO:0009245 lipid A biosynthetic process 1.59% (1/63) 7.01 0.007746 0.041225
GO:0031365 N-terminal protein amino acid modification 1.59% (1/63) 6.69 0.009673 0.048992
GO:0006368 transcription elongation by RNA polymerase II 1.59% (1/63) 6.69 0.009673 0.048992
GO:0006354 DNA-templated transcription elongation 1.59% (1/63) 6.69 0.009673 0.048992
Enriched Clades (corrected p-value < 0.05) (download table)
Clade % in cluster Enrichment log2 p-value Corrected p-value Gene Family Method
No enriched Clades found
Similar Clusters (download table)
Species Clustering Method Target Jaccard index Gene Family Method (for comparison) Actions
No similar clusters found
Sequences (63) (download table)

InterPro Domains

GO Terms

CAZYmes

Family Terms